Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20414 | 61465;61466;61467 | chr2:178590485;178590484;178590483 | chr2:179455212;179455211;179455210 |
N2AB | 18773 | 56542;56543;56544 | chr2:178590485;178590484;178590483 | chr2:179455212;179455211;179455210 |
N2A | 17846 | 53761;53762;53763 | chr2:178590485;178590484;178590483 | chr2:179455212;179455211;179455210 |
N2B | 11349 | 34270;34271;34272 | chr2:178590485;178590484;178590483 | chr2:179455212;179455211;179455210 |
Novex-1 | 11474 | 34645;34646;34647 | chr2:178590485;178590484;178590483 | chr2:179455212;179455211;179455210 |
Novex-2 | 11541 | 34846;34847;34848 | chr2:178590485;178590484;178590483 | chr2:179455212;179455211;179455210 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 0.864 | N | 0.636 | 0.226 | 0.484400871567 | gnomAD-4.0.0 | 1.36894E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16012E-05 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2091 | likely_benign | 0.2523 | benign | -0.385 | Destabilizing | 0.645 | D | 0.389 | neutral | N | 0.463226986 | None | None | N |
G/C | 0.3616 | ambiguous | 0.4029 | ambiguous | -1.072 | Destabilizing | 0.993 | D | 0.698 | prob.neutral | N | 0.489600127 | None | None | N |
G/D | 0.2045 | likely_benign | 0.2059 | benign | -0.793 | Destabilizing | 0.006 | N | 0.374 | neutral | N | 0.489011539 | None | None | N |
G/E | 0.2468 | likely_benign | 0.2659 | benign | -0.945 | Destabilizing | 0.547 | D | 0.469 | neutral | None | None | None | None | N |
G/F | 0.7255 | likely_pathogenic | 0.76 | pathogenic | -1.118 | Destabilizing | 0.981 | D | 0.668 | neutral | None | None | None | None | N |
G/H | 0.4875 | ambiguous | 0.5302 | ambiguous | -0.407 | Destabilizing | 0.985 | D | 0.607 | neutral | None | None | None | None | N |
G/I | 0.5059 | ambiguous | 0.5611 | ambiguous | -0.635 | Destabilizing | 0.894 | D | 0.689 | prob.neutral | None | None | None | None | N |
G/K | 0.5408 | ambiguous | 0.5752 | pathogenic | -0.833 | Destabilizing | 0.894 | D | 0.535 | neutral | None | None | None | None | N |
G/L | 0.5942 | likely_pathogenic | 0.6477 | pathogenic | -0.635 | Destabilizing | 0.894 | D | 0.669 | neutral | None | None | None | None | N |
G/M | 0.6105 | likely_pathogenic | 0.6655 | pathogenic | -0.799 | Destabilizing | 0.995 | D | 0.69 | prob.neutral | None | None | None | None | N |
G/N | 0.2765 | likely_benign | 0.2975 | benign | -0.546 | Destabilizing | 0.547 | D | 0.367 | neutral | None | None | None | None | N |
G/P | 0.8897 | likely_pathogenic | 0.8974 | pathogenic | -0.528 | Destabilizing | 0.945 | D | 0.587 | neutral | None | None | None | None | N |
G/Q | 0.3862 | ambiguous | 0.4211 | ambiguous | -0.813 | Destabilizing | 0.894 | D | 0.585 | neutral | None | None | None | None | N |
G/R | 0.4371 | ambiguous | 0.4696 | ambiguous | -0.378 | Destabilizing | 0.864 | D | 0.587 | neutral | N | 0.46446798 | None | None | N |
G/S | 0.1531 | likely_benign | 0.1779 | benign | -0.678 | Destabilizing | 0.477 | N | 0.362 | neutral | N | 0.488531536 | None | None | N |
G/T | 0.2602 | likely_benign | 0.3081 | benign | -0.77 | Destabilizing | 0.07 | N | 0.369 | neutral | None | None | None | None | N |
G/V | 0.3645 | ambiguous | 0.4249 | ambiguous | -0.528 | Destabilizing | 0.864 | D | 0.636 | neutral | N | 0.474204897 | None | None | N |
G/W | 0.602 | likely_pathogenic | 0.6051 | pathogenic | -1.197 | Destabilizing | 0.995 | D | 0.663 | neutral | None | None | None | None | N |
G/Y | 0.5872 | likely_pathogenic | 0.6253 | pathogenic | -0.917 | Destabilizing | 0.995 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.