Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20419 | 61480;61481;61482 | chr2:178590470;178590469;178590468 | chr2:179455197;179455196;179455195 |
N2AB | 18778 | 56557;56558;56559 | chr2:178590470;178590469;178590468 | chr2:179455197;179455196;179455195 |
N2A | 17851 | 53776;53777;53778 | chr2:178590470;178590469;178590468 | chr2:179455197;179455196;179455195 |
N2B | 11354 | 34285;34286;34287 | chr2:178590470;178590469;178590468 | chr2:179455197;179455196;179455195 |
Novex-1 | 11479 | 34660;34661;34662 | chr2:178590470;178590469;178590468 | chr2:179455197;179455196;179455195 |
Novex-2 | 11546 | 34861;34862;34863 | chr2:178590470;178590469;178590468 | chr2:179455197;179455196;179455195 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.295 | N | 0.24 | 0.133 | 0.0401082797425 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/K | None | None | None | N | 0.071 | 0.103 | 0.0666544352282 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1307 | likely_benign | 0.1788 | benign | -0.702 | Destabilizing | 0.007 | N | 0.212 | neutral | None | None | None | None | N |
N/C | 0.1652 | likely_benign | 0.233 | benign | 0.15 | Stabilizing | 0.676 | D | 0.307 | neutral | None | None | None | None | N |
N/D | 0.1042 | likely_benign | 0.0903 | benign | -0.225 | Destabilizing | None | N | 0.077 | neutral | N | 0.399155617 | None | None | N |
N/E | 0.1463 | likely_benign | 0.1426 | benign | -0.169 | Destabilizing | None | N | 0.072 | neutral | None | None | None | None | N |
N/F | 0.3382 | likely_benign | 0.4484 | ambiguous | -0.537 | Destabilizing | 0.356 | N | 0.372 | neutral | None | None | None | None | N |
N/G | 0.2074 | likely_benign | 0.2727 | benign | -1.009 | Destabilizing | 0.007 | N | 0.139 | neutral | None | None | None | None | N |
N/H | 0.0922 | likely_benign | 0.0944 | benign | -0.85 | Destabilizing | 0.295 | N | 0.24 | neutral | N | 0.411103407 | None | None | N |
N/I | 0.1081 | likely_benign | 0.1311 | benign | 0.059 | Stabilizing | 0.055 | N | 0.391 | neutral | N | 0.388842623 | None | None | N |
N/K | 0.1687 | likely_benign | 0.1705 | benign | -0.289 | Destabilizing | None | N | 0.071 | neutral | N | 0.353343183 | None | None | N |
N/L | 0.1345 | likely_benign | 0.1698 | benign | 0.059 | Stabilizing | 0.016 | N | 0.285 | neutral | None | None | None | None | N |
N/M | 0.1608 | likely_benign | 0.2199 | benign | 0.451 | Stabilizing | 0.628 | D | 0.305 | neutral | None | None | None | None | N |
N/P | 0.7965 | likely_pathogenic | 0.8077 | pathogenic | -0.165 | Destabilizing | 0.072 | N | 0.343 | neutral | None | None | None | None | N |
N/Q | 0.1539 | likely_benign | 0.1746 | benign | -0.732 | Destabilizing | 0.038 | N | 0.141 | neutral | None | None | None | None | N |
N/R | 0.2112 | likely_benign | 0.2305 | benign | -0.318 | Destabilizing | 0.016 | N | 0.155 | neutral | None | None | None | None | N |
N/S | 0.0715 | likely_benign | 0.087 | benign | -0.706 | Destabilizing | None | N | 0.109 | neutral | N | 0.404196078 | None | None | N |
N/T | 0.0697 | likely_benign | 0.0925 | benign | -0.472 | Destabilizing | None | N | 0.105 | neutral | N | 0.379337706 | None | None | N |
N/V | 0.1083 | likely_benign | 0.1299 | benign | -0.165 | Destabilizing | 0.016 | N | 0.328 | neutral | None | None | None | None | N |
N/W | 0.5097 | ambiguous | 0.6102 | pathogenic | -0.351 | Destabilizing | 0.864 | D | 0.33 | neutral | None | None | None | None | N |
N/Y | 0.1204 | likely_benign | 0.1321 | benign | -0.166 | Destabilizing | 0.295 | N | 0.352 | neutral | N | 0.423013912 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.