Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20420 | 61483;61484;61485 | chr2:178590467;178590466;178590465 | chr2:179455194;179455193;179455192 |
N2AB | 18779 | 56560;56561;56562 | chr2:178590467;178590466;178590465 | chr2:179455194;179455193;179455192 |
N2A | 17852 | 53779;53780;53781 | chr2:178590467;178590466;178590465 | chr2:179455194;179455193;179455192 |
N2B | 11355 | 34288;34289;34290 | chr2:178590467;178590466;178590465 | chr2:179455194;179455193;179455192 |
Novex-1 | 11480 | 34663;34664;34665 | chr2:178590467;178590466;178590465 | chr2:179455194;179455193;179455192 |
Novex-2 | 11547 | 34864;34865;34866 | chr2:178590467;178590466;178590465 | chr2:179455194;179455193;179455192 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs750271660 | None | 0.92 | N | 0.499 | 0.252 | 0.259761712551 | gnomAD-4.0.0 | 3.90161E-05 | None | None | None | None | N | None | 2.99061E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.03848E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6899 | likely_pathogenic | 0.5632 | ambiguous | -0.96 | Destabilizing | 0.863 | D | 0.502 | neutral | None | None | None | None | N |
R/C | 0.2717 | likely_benign | 0.246 | benign | -0.904 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
R/D | 0.9164 | likely_pathogenic | 0.8704 | pathogenic | -0.197 | Destabilizing | 0.969 | D | 0.601 | neutral | None | None | None | None | N |
R/E | 0.6902 | likely_pathogenic | 0.5829 | pathogenic | -0.077 | Destabilizing | 0.863 | D | 0.481 | neutral | None | None | None | None | N |
R/F | 0.8539 | likely_pathogenic | 0.7985 | pathogenic | -0.777 | Destabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | N |
R/G | 0.6769 | likely_pathogenic | 0.5688 | pathogenic | -1.273 | Destabilizing | 0.959 | D | 0.555 | neutral | N | 0.473686189 | None | None | N |
R/H | 0.2211 | likely_benign | 0.1968 | benign | -1.472 | Destabilizing | 0.997 | D | 0.548 | neutral | None | None | None | None | N |
R/I | 0.4545 | ambiguous | 0.3462 | ambiguous | -0.116 | Destabilizing | 0.997 | D | 0.647 | neutral | None | None | None | None | N |
R/K | 0.1541 | likely_benign | 0.1351 | benign | -1.064 | Destabilizing | 0.021 | N | 0.166 | neutral | N | 0.401713133 | None | None | N |
R/L | 0.4724 | ambiguous | 0.3914 | ambiguous | -0.116 | Destabilizing | 0.969 | D | 0.555 | neutral | None | None | None | None | N |
R/M | 0.5559 | ambiguous | 0.4659 | ambiguous | -0.381 | Destabilizing | 0.996 | D | 0.604 | neutral | N | 0.518942949 | None | None | N |
R/N | 0.8386 | likely_pathogenic | 0.7841 | pathogenic | -0.458 | Destabilizing | 0.969 | D | 0.485 | neutral | None | None | None | None | N |
R/P | 0.6828 | likely_pathogenic | 0.5556 | ambiguous | -0.378 | Destabilizing | 0.997 | D | 0.623 | neutral | None | None | None | None | N |
R/Q | 0.18 | likely_benign | 0.1546 | benign | -0.651 | Destabilizing | 0.939 | D | 0.499 | neutral | None | None | None | None | N |
R/S | 0.8066 | likely_pathogenic | 0.7268 | pathogenic | -1.261 | Destabilizing | 0.92 | D | 0.499 | neutral | N | 0.489830763 | None | None | N |
R/T | 0.4923 | ambiguous | 0.3523 | ambiguous | -0.962 | Destabilizing | 0.959 | D | 0.533 | neutral | N | 0.457334342 | None | None | N |
R/V | 0.5206 | ambiguous | 0.413 | ambiguous | -0.378 | Destabilizing | 0.991 | D | 0.606 | neutral | None | None | None | None | N |
R/W | 0.4305 | ambiguous | 0.3712 | ambiguous | -0.386 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.484789005 | None | None | N |
R/Y | 0.7033 | likely_pathogenic | 0.6385 | pathogenic | -0.113 | Destabilizing | 0.997 | D | 0.649 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.