Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20421 | 61486;61487;61488 | chr2:178590464;178590463;178590462 | chr2:179455191;179455190;179455189 |
N2AB | 18780 | 56563;56564;56565 | chr2:178590464;178590463;178590462 | chr2:179455191;179455190;179455189 |
N2A | 17853 | 53782;53783;53784 | chr2:178590464;178590463;178590462 | chr2:179455191;179455190;179455189 |
N2B | 11356 | 34291;34292;34293 | chr2:178590464;178590463;178590462 | chr2:179455191;179455190;179455189 |
Novex-1 | 11481 | 34666;34667;34668 | chr2:178590464;178590463;178590462 | chr2:179455191;179455190;179455189 |
Novex-2 | 11548 | 34867;34868;34869 | chr2:178590464;178590463;178590462 | chr2:179455191;179455190;179455189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.961 | N | 0.502 | 0.347 | 0.467501455318 | gnomAD-4.0.0 | 1.59277E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8609E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6996 | likely_pathogenic | 0.7187 | pathogenic | -2.076 | Highly Destabilizing | 0.931 | D | 0.523 | neutral | None | None | None | None | I |
I/C | 0.718 | likely_pathogenic | 0.7397 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/D | 0.9401 | likely_pathogenic | 0.9457 | pathogenic | -1.967 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
I/E | 0.8511 | likely_pathogenic | 0.8639 | pathogenic | -1.836 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
I/F | 0.3799 | ambiguous | 0.3939 | ambiguous | -1.342 | Destabilizing | 0.994 | D | 0.535 | neutral | N | 0.494110714 | None | None | I |
I/G | 0.9207 | likely_pathogenic | 0.9313 | pathogenic | -2.517 | Highly Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
I/H | 0.8334 | likely_pathogenic | 0.8599 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
I/K | 0.7599 | likely_pathogenic | 0.7817 | pathogenic | -1.556 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
I/L | 0.2032 | likely_benign | 0.2133 | benign | -0.863 | Destabilizing | 0.689 | D | 0.383 | neutral | N | 0.442468385 | None | None | I |
I/M | 0.1813 | likely_benign | 0.1918 | benign | -0.629 | Destabilizing | 0.994 | D | 0.563 | neutral | N | 0.494457431 | None | None | I |
I/N | 0.68 | likely_pathogenic | 0.6993 | pathogenic | -1.665 | Destabilizing | 0.998 | D | 0.767 | deleterious | N | 0.474935231 | None | None | I |
I/P | 0.9405 | likely_pathogenic | 0.9457 | pathogenic | -1.242 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
I/Q | 0.7704 | likely_pathogenic | 0.7977 | pathogenic | -1.673 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | I |
I/R | 0.7213 | likely_pathogenic | 0.7523 | pathogenic | -1.091 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | I |
I/S | 0.7188 | likely_pathogenic | 0.7434 | pathogenic | -2.3 | Highly Destabilizing | 0.994 | D | 0.669 | neutral | N | 0.501018044 | None | None | I |
I/T | 0.6268 | likely_pathogenic | 0.6595 | pathogenic | -2.032 | Highly Destabilizing | 0.961 | D | 0.502 | neutral | N | 0.480546771 | None | None | I |
I/V | 0.1049 | likely_benign | 0.1099 | benign | -1.242 | Destabilizing | 0.122 | N | 0.204 | neutral | N | 0.364794249 | None | None | I |
I/W | 0.8856 | likely_pathogenic | 0.9012 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
I/Y | 0.7552 | likely_pathogenic | 0.7634 | pathogenic | -1.302 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.