Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20422 | 61489;61490;61491 | chr2:178590461;178590460;178590459 | chr2:179455188;179455187;179455186 |
N2AB | 18781 | 56566;56567;56568 | chr2:178590461;178590460;178590459 | chr2:179455188;179455187;179455186 |
N2A | 17854 | 53785;53786;53787 | chr2:178590461;178590460;178590459 | chr2:179455188;179455187;179455186 |
N2B | 11357 | 34294;34295;34296 | chr2:178590461;178590460;178590459 | chr2:179455188;179455187;179455186 |
Novex-1 | 11482 | 34669;34670;34671 | chr2:178590461;178590460;178590459 | chr2:179455188;179455187;179455186 |
Novex-2 | 11549 | 34870;34871;34872 | chr2:178590461;178590460;178590459 | chr2:179455188;179455187;179455186 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.999 | N | 0.611 | 0.333 | 0.218845423259 | gnomAD-4.0.0 | 1.59283E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86094E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8544 | likely_pathogenic | 0.868 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
N/C | 0.6267 | likely_pathogenic | 0.6289 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
N/D | 0.8421 | likely_pathogenic | 0.8524 | pathogenic | -0.944 | Destabilizing | 0.999 | D | 0.646 | neutral | N | 0.468116782 | None | None | N |
N/E | 0.9672 | likely_pathogenic | 0.9639 | pathogenic | -0.73 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
N/F | 0.9788 | likely_pathogenic | 0.978 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
N/G | 0.7952 | likely_pathogenic | 0.8008 | pathogenic | -1.529 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
N/H | 0.6519 | likely_pathogenic | 0.653 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.502552131 | None | None | N |
N/I | 0.8784 | likely_pathogenic | 0.8806 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.804 | deleterious | N | 0.478080735 | None | None | N |
N/K | 0.981 | likely_pathogenic | 0.9817 | pathogenic | -0.076 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.51821223 | None | None | N |
N/L | 0.8311 | likely_pathogenic | 0.8267 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
N/M | 0.9072 | likely_pathogenic | 0.9114 | pathogenic | 0.211 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/P | 0.9139 | likely_pathogenic | 0.9262 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/Q | 0.9238 | likely_pathogenic | 0.9236 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
N/R | 0.957 | likely_pathogenic | 0.9611 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
N/S | 0.2063 | likely_benign | 0.23 | benign | -1.075 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.50129855 | None | None | N |
N/T | 0.4631 | ambiguous | 0.4978 | ambiguous | -0.644 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.477074896 | None | None | N |
N/V | 0.8433 | likely_pathogenic | 0.8458 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
N/W | 0.9854 | likely_pathogenic | 0.9855 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
N/Y | 0.8658 | likely_pathogenic | 0.8629 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.52327412 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.