Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20425 | 61498;61499;61500 | chr2:178590452;178590451;178590450 | chr2:179455179;179455178;179455177 |
N2AB | 18784 | 56575;56576;56577 | chr2:178590452;178590451;178590450 | chr2:179455179;179455178;179455177 |
N2A | 17857 | 53794;53795;53796 | chr2:178590452;178590451;178590450 | chr2:179455179;179455178;179455177 |
N2B | 11360 | 34303;34304;34305 | chr2:178590452;178590451;178590450 | chr2:179455179;179455178;179455177 |
Novex-1 | 11485 | 34678;34679;34680 | chr2:178590452;178590451;178590450 | chr2:179455179;179455178;179455177 |
Novex-2 | 11552 | 34879;34880;34881 | chr2:178590452;178590451;178590450 | chr2:179455179;179455178;179455177 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1252644947 | 0.112 | 0.001 | N | 0.143 | 0.044 | 0.12205267543 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.67954E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1252644947 | 0.112 | 0.001 | N | 0.143 | 0.044 | 0.12205267543 | gnomAD-4.0.0 | 6.37196E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.11191E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1471584816 | -0.264 | 0.521 | N | 0.435 | 0.294 | 0.289847578895 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1471584816 | -0.264 | 0.521 | N | 0.435 | 0.294 | 0.289847578895 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77994E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.201 | likely_benign | 0.2108 | benign | -0.166 | Destabilizing | 0.007 | N | 0.279 | neutral | N | 0.496911451 | None | None | I |
E/C | 0.8263 | likely_pathogenic | 0.8486 | pathogenic | -0.034 | Destabilizing | 0.987 | D | 0.409 | neutral | None | None | None | None | I |
E/D | 0.1014 | likely_benign | 0.1062 | benign | -0.184 | Destabilizing | 0.001 | N | 0.143 | neutral | N | 0.446312059 | None | None | I |
E/F | 0.7992 | likely_pathogenic | 0.7998 | pathogenic | -0.15 | Destabilizing | 0.953 | D | 0.396 | neutral | None | None | None | None | I |
E/G | 0.2182 | likely_benign | 0.2196 | benign | -0.32 | Destabilizing | 0.521 | D | 0.435 | neutral | N | 0.514457062 | None | None | I |
E/H | 0.4877 | ambiguous | 0.484 | ambiguous | 0.237 | Stabilizing | 0.984 | D | 0.325 | neutral | None | None | None | None | I |
E/I | 0.4474 | ambiguous | 0.4354 | ambiguous | 0.191 | Stabilizing | 0.91 | D | 0.415 | neutral | None | None | None | None | I |
E/K | 0.2185 | likely_benign | 0.204 | benign | 0.414 | Stabilizing | 0.684 | D | 0.437 | neutral | N | 0.506339011 | None | None | I |
E/L | 0.5213 | ambiguous | 0.5293 | ambiguous | 0.191 | Stabilizing | 0.59 | D | 0.422 | neutral | None | None | None | None | I |
E/M | 0.5489 | ambiguous | 0.5648 | pathogenic | 0.133 | Stabilizing | 0.996 | D | 0.385 | neutral | None | None | None | None | I |
E/N | 0.2456 | likely_benign | 0.2515 | benign | 0.194 | Stabilizing | 0.59 | D | 0.394 | neutral | None | None | None | None | I |
E/P | 0.7952 | likely_pathogenic | 0.7848 | pathogenic | 0.092 | Stabilizing | 0.953 | D | 0.37 | neutral | None | None | None | None | I |
E/Q | 0.1704 | likely_benign | 0.1706 | benign | 0.219 | Stabilizing | 0.815 | D | 0.415 | neutral | D | 0.522809973 | None | None | I |
E/R | 0.3567 | ambiguous | 0.3414 | ambiguous | 0.606 | Stabilizing | 0.953 | D | 0.357 | neutral | None | None | None | None | I |
E/S | 0.232 | likely_benign | 0.237 | benign | 0.029 | Stabilizing | 0.59 | D | 0.387 | neutral | None | None | None | None | I |
E/T | 0.2256 | likely_benign | 0.2365 | benign | 0.157 | Stabilizing | 0.742 | D | 0.412 | neutral | None | None | None | None | I |
E/V | 0.2688 | likely_benign | 0.2692 | benign | 0.092 | Stabilizing | 0.521 | D | 0.421 | neutral | N | 0.474037378 | None | None | I |
E/W | 0.9264 | likely_pathogenic | 0.9275 | pathogenic | -0.064 | Destabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | I |
E/Y | 0.6534 | likely_pathogenic | 0.6512 | pathogenic | 0.08 | Stabilizing | 0.984 | D | 0.395 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.