Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20427 | 61504;61505;61506 | chr2:178590446;178590445;178590444 | chr2:179455173;179455172;179455171 |
N2AB | 18786 | 56581;56582;56583 | chr2:178590446;178590445;178590444 | chr2:179455173;179455172;179455171 |
N2A | 17859 | 53800;53801;53802 | chr2:178590446;178590445;178590444 | chr2:179455173;179455172;179455171 |
N2B | 11362 | 34309;34310;34311 | chr2:178590446;178590445;178590444 | chr2:179455173;179455172;179455171 |
Novex-1 | 11487 | 34684;34685;34686 | chr2:178590446;178590445;178590444 | chr2:179455173;179455172;179455171 |
Novex-2 | 11554 | 34885;34886;34887 | chr2:178590446;178590445;178590444 | chr2:179455173;179455172;179455171 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs2049964140 | None | 0.942 | N | 0.667 | 0.391 | 0.806085154697 | gnomAD-4.0.0 | 4.10725E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.3985E-06 | 0 | 0 |
I/T | None | None | 0.822 | N | 0.593 | 0.303 | 0.583710156576 | gnomAD-4.0.0 | 6.84541E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9975E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9258 | likely_pathogenic | 0.9267 | pathogenic | -2.007 | Highly Destabilizing | 0.754 | D | 0.485 | neutral | None | None | None | None | N |
I/C | 0.9038 | likely_pathogenic | 0.9287 | pathogenic | -1.048 | Destabilizing | 0.994 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/D | 0.9906 | likely_pathogenic | 0.9909 | pathogenic | -2.282 | Highly Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
I/E | 0.9691 | likely_pathogenic | 0.9694 | pathogenic | -2.016 | Highly Destabilizing | 0.978 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/F | 0.6573 | likely_pathogenic | 0.6531 | pathogenic | -1.127 | Destabilizing | 0.942 | D | 0.591 | neutral | N | 0.477698661 | None | None | N |
I/G | 0.9824 | likely_pathogenic | 0.9827 | pathogenic | -2.57 | Highly Destabilizing | 0.978 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/H | 0.9492 | likely_pathogenic | 0.9578 | pathogenic | -2.185 | Highly Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
I/K | 0.9342 | likely_pathogenic | 0.9398 | pathogenic | -1.373 | Destabilizing | 0.978 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/L | 0.2374 | likely_benign | 0.248 | benign | -0.371 | Destabilizing | 0.294 | N | 0.399 | neutral | N | 0.49764217 | None | None | N |
I/M | 0.3731 | ambiguous | 0.3916 | ambiguous | -0.308 | Destabilizing | 0.942 | D | 0.599 | neutral | N | 0.473090305 | None | None | N |
I/N | 0.8802 | likely_pathogenic | 0.8951 | pathogenic | -1.842 | Destabilizing | 0.99 | D | 0.759 | deleterious | N | 0.521231105 | None | None | N |
I/P | 0.9582 | likely_pathogenic | 0.9557 | pathogenic | -0.898 | Destabilizing | 0.993 | D | 0.757 | deleterious | None | None | None | None | N |
I/Q | 0.9105 | likely_pathogenic | 0.9226 | pathogenic | -1.6 | Destabilizing | 0.993 | D | 0.758 | deleterious | None | None | None | None | N |
I/R | 0.9075 | likely_pathogenic | 0.9168 | pathogenic | -1.343 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
I/S | 0.905 | likely_pathogenic | 0.9082 | pathogenic | -2.491 | Highly Destabilizing | 0.942 | D | 0.667 | neutral | N | 0.506645655 | None | None | N |
I/T | 0.9014 | likely_pathogenic | 0.9138 | pathogenic | -2.07 | Highly Destabilizing | 0.822 | D | 0.593 | neutral | N | 0.498311386 | None | None | N |
I/V | 0.1941 | likely_benign | 0.223 | benign | -0.898 | Destabilizing | 0.006 | N | 0.235 | neutral | N | 0.468186054 | None | None | N |
I/W | 0.971 | likely_pathogenic | 0.9727 | pathogenic | -1.576 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/Y | 0.9333 | likely_pathogenic | 0.935 | pathogenic | -1.189 | Destabilizing | 0.978 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.