Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20428 | 61507;61508;61509 | chr2:178590443;178590442;178590441 | chr2:179455170;179455169;179455168 |
N2AB | 18787 | 56584;56585;56586 | chr2:178590443;178590442;178590441 | chr2:179455170;179455169;179455168 |
N2A | 17860 | 53803;53804;53805 | chr2:178590443;178590442;178590441 | chr2:179455170;179455169;179455168 |
N2B | 11363 | 34312;34313;34314 | chr2:178590443;178590442;178590441 | chr2:179455170;179455169;179455168 |
Novex-1 | 11488 | 34687;34688;34689 | chr2:178590443;178590442;178590441 | chr2:179455170;179455169;179455168 |
Novex-2 | 11555 | 34888;34889;34890 | chr2:178590443;178590442;178590441 | chr2:179455170;179455169;179455168 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1158402913 | 0.068 | 0.001 | N | 0.177 | 0.092 | 0.0806252709748 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs1158402913 | 0.068 | 0.001 | N | 0.177 | 0.092 | 0.0806252709748 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/K | rs1158402913 | 0.068 | 0.001 | N | 0.177 | 0.092 | 0.0806252709748 | gnomAD-4.0.0 | 2.03012E-06 | None | None | None | None | I | None | 1.74752E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20498E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5325 | ambiguous | 0.486 | ambiguous | 0.126 | Stabilizing | 0.25 | N | 0.413 | neutral | None | None | None | None | I |
R/C | 0.3032 | likely_benign | 0.3209 | benign | -0.059 | Destabilizing | 0.992 | D | 0.391 | neutral | None | None | None | None | I |
R/D | 0.7588 | likely_pathogenic | 0.746 | pathogenic | -0.061 | Destabilizing | 0.617 | D | 0.475 | neutral | None | None | None | None | I |
R/E | 0.4892 | ambiguous | 0.4667 | ambiguous | 0.015 | Stabilizing | 0.25 | N | 0.423 | neutral | None | None | None | None | I |
R/F | 0.7442 | likely_pathogenic | 0.71 | pathogenic | -0.015 | Destabilizing | 0.972 | D | 0.395 | neutral | None | None | None | None | I |
R/G | 0.3684 | ambiguous | 0.3425 | ambiguous | -0.084 | Destabilizing | 0.549 | D | 0.462 | neutral | N | 0.459515351 | None | None | I |
R/H | 0.1572 | likely_benign | 0.157 | benign | -0.592 | Destabilizing | 0.92 | D | 0.453 | neutral | None | None | None | None | I |
R/I | 0.5147 | ambiguous | 0.4568 | ambiguous | 0.648 | Stabilizing | 0.92 | D | 0.421 | neutral | None | None | None | None | I |
R/K | 0.1113 | likely_benign | 0.1148 | benign | 0.038 | Stabilizing | 0.001 | N | 0.177 | neutral | N | 0.373800521 | None | None | I |
R/L | 0.3566 | ambiguous | 0.3328 | benign | 0.648 | Stabilizing | 0.617 | D | 0.462 | neutral | None | None | None | None | I |
R/M | 0.4939 | ambiguous | 0.4516 | ambiguous | 0.093 | Stabilizing | 0.896 | D | 0.427 | neutral | N | 0.455145455 | None | None | I |
R/N | 0.661 | likely_pathogenic | 0.6538 | pathogenic | 0.222 | Stabilizing | 0.617 | D | 0.409 | neutral | None | None | None | None | I |
R/P | 0.347 | ambiguous | 0.326 | benign | 0.495 | Stabilizing | 0.92 | D | 0.425 | neutral | None | None | None | None | I |
R/Q | 0.136 | likely_benign | 0.1325 | benign | 0.168 | Stabilizing | 0.021 | N | 0.253 | neutral | None | None | None | None | I |
R/S | 0.5673 | likely_pathogenic | 0.5363 | ambiguous | -0.067 | Destabilizing | 0.379 | N | 0.413 | neutral | N | 0.446103337 | None | None | I |
R/T | 0.3508 | ambiguous | 0.3033 | benign | 0.146 | Stabilizing | 0.549 | D | 0.443 | neutral | N | 0.433270112 | None | None | I |
R/V | 0.5358 | ambiguous | 0.4947 | ambiguous | 0.495 | Stabilizing | 0.617 | D | 0.424 | neutral | None | None | None | None | I |
R/W | 0.3379 | likely_benign | 0.3106 | benign | -0.086 | Destabilizing | 0.99 | D | 0.408 | neutral | N | 0.46675525 | None | None | I |
R/Y | 0.5755 | likely_pathogenic | 0.5398 | ambiguous | 0.319 | Stabilizing | 0.92 | D | 0.421 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.