Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20432 | 61519;61520;61521 | chr2:178590431;178590430;178590429 | chr2:179455158;179455157;179455156 |
N2AB | 18791 | 56596;56597;56598 | chr2:178590431;178590430;178590429 | chr2:179455158;179455157;179455156 |
N2A | 17864 | 53815;53816;53817 | chr2:178590431;178590430;178590429 | chr2:179455158;179455157;179455156 |
N2B | 11367 | 34324;34325;34326 | chr2:178590431;178590430;178590429 | chr2:179455158;179455157;179455156 |
Novex-1 | 11492 | 34699;34700;34701 | chr2:178590431;178590430;178590429 | chr2:179455158;179455157;179455156 |
Novex-2 | 11559 | 34900;34901;34902 | chr2:178590431;178590430;178590429 | chr2:179455158;179455157;179455156 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.782 | N | 0.58 | 0.377 | 0.66614110018 | gnomAD-4.0.0 | 3.18971E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.87985E-05 | 0 |
F/V | rs1287181968 | -1.719 | 0.505 | N | 0.457 | 0.386 | 0.586295999888 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
F/V | rs1287181968 | -1.719 | 0.505 | N | 0.457 | 0.386 | 0.586295999888 | gnomAD-4.0.0 | 1.59484E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86302E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9671 | likely_pathogenic | 0.9471 | pathogenic | -2.402 | Highly Destabilizing | 0.575 | D | 0.536 | neutral | None | None | None | None | N |
F/C | 0.691 | likely_pathogenic | 0.6614 | pathogenic | -1.819 | Destabilizing | 0.988 | D | 0.688 | prob.neutral | N | 0.468380842 | None | None | N |
F/D | 0.9951 | likely_pathogenic | 0.9927 | pathogenic | -2.428 | Highly Destabilizing | 0.906 | D | 0.692 | prob.neutral | None | None | None | None | N |
F/E | 0.9941 | likely_pathogenic | 0.9901 | pathogenic | -2.262 | Highly Destabilizing | 0.906 | D | 0.67 | neutral | None | None | None | None | N |
F/G | 0.9862 | likely_pathogenic | 0.9771 | pathogenic | -2.775 | Highly Destabilizing | 0.906 | D | 0.637 | neutral | None | None | None | None | N |
F/H | 0.8657 | likely_pathogenic | 0.8531 | pathogenic | -1.174 | Destabilizing | 0.826 | D | 0.565 | neutral | None | None | None | None | N |
F/I | 0.8111 | likely_pathogenic | 0.7444 | pathogenic | -1.215 | Destabilizing | 0.505 | D | 0.405 | neutral | N | 0.501895983 | None | None | N |
F/K | 0.9894 | likely_pathogenic | 0.9836 | pathogenic | -2.18 | Highly Destabilizing | 0.826 | D | 0.674 | neutral | None | None | None | None | N |
F/L | 0.9672 | likely_pathogenic | 0.9593 | pathogenic | -1.215 | Destabilizing | 0.174 | N | 0.445 | neutral | N | 0.480576562 | None | None | N |
F/M | 0.8913 | likely_pathogenic | 0.8614 | pathogenic | -1.01 | Destabilizing | 0.967 | D | 0.445 | neutral | None | None | None | None | N |
F/N | 0.979 | likely_pathogenic | 0.9714 | pathogenic | -2.623 | Highly Destabilizing | 0.906 | D | 0.71 | prob.delet. | None | None | None | None | N |
F/P | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -1.615 | Destabilizing | 0.967 | D | 0.747 | deleterious | None | None | None | None | N |
F/Q | 0.9796 | likely_pathogenic | 0.9705 | pathogenic | -2.555 | Highly Destabilizing | 0.906 | D | 0.738 | prob.delet. | None | None | None | None | N |
F/R | 0.9737 | likely_pathogenic | 0.963 | pathogenic | -1.688 | Destabilizing | 0.906 | D | 0.725 | prob.delet. | None | None | None | None | N |
F/S | 0.9533 | likely_pathogenic | 0.9331 | pathogenic | -3.238 | Highly Destabilizing | 0.782 | D | 0.58 | neutral | N | 0.473396701 | None | None | N |
F/T | 0.9747 | likely_pathogenic | 0.9615 | pathogenic | -2.962 | Highly Destabilizing | 0.906 | D | 0.579 | neutral | None | None | None | None | N |
F/V | 0.7717 | likely_pathogenic | 0.7023 | pathogenic | -1.615 | Destabilizing | 0.505 | D | 0.457 | neutral | N | 0.496735306 | None | None | N |
F/W | 0.6344 | likely_pathogenic | 0.6304 | pathogenic | -0.422 | Destabilizing | 0.906 | D | 0.461 | neutral | None | None | None | None | N |
F/Y | 0.1743 | likely_benign | 0.1902 | benign | -0.74 | Destabilizing | None | N | 0.178 | neutral | N | 0.394360299 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.