Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20439 | 61540;61541;61542 | chr2:178590410;178590409;178590408 | chr2:179455137;179455136;179455135 |
N2AB | 18798 | 56617;56618;56619 | chr2:178590410;178590409;178590408 | chr2:179455137;179455136;179455135 |
N2A | 17871 | 53836;53837;53838 | chr2:178590410;178590409;178590408 | chr2:179455137;179455136;179455135 |
N2B | 11374 | 34345;34346;34347 | chr2:178590410;178590409;178590408 | chr2:179455137;179455136;179455135 |
Novex-1 | 11499 | 34720;34721;34722 | chr2:178590410;178590409;178590408 | chr2:179455137;179455136;179455135 |
Novex-2 | 11566 | 34921;34922;34923 | chr2:178590410;178590409;178590408 | chr2:179455137;179455136;179455135 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs778185086 | -0.179 | 0.999 | N | 0.669 | 0.393 | 0.526181570707 | gnomAD-2.1.1 | 4.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.45E-05 | None | 0 | 0 | 0 |
E/K | rs778185086 | -0.179 | 0.999 | N | 0.669 | 0.393 | 0.526181570707 | gnomAD-4.0.0 | 1.60469E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46327E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2307 | likely_benign | 0.2022 | benign | -0.635 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.477165228 | None | None | N |
E/C | 0.94 | likely_pathogenic | 0.9247 | pathogenic | -0.186 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
E/D | 0.3569 | ambiguous | 0.3013 | benign | -0.815 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.489437041 | None | None | N |
E/F | 0.9544 | likely_pathogenic | 0.9331 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
E/G | 0.4507 | ambiguous | 0.3699 | ambiguous | -0.909 | Destabilizing | 1.0 | D | 0.609 | neutral | N | 0.504832271 | None | None | N |
E/H | 0.8157 | likely_pathogenic | 0.7424 | pathogenic | -0.734 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
E/I | 0.7143 | likely_pathogenic | 0.6632 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
E/K | 0.4394 | ambiguous | 0.3244 | benign | -0.241 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.485460568 | None | None | N |
E/L | 0.7632 | likely_pathogenic | 0.6921 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
E/M | 0.7833 | likely_pathogenic | 0.7348 | pathogenic | 0.433 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
E/N | 0.6438 | likely_pathogenic | 0.5683 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
E/P | 0.4698 | ambiguous | 0.3953 | ambiguous | -0.138 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
E/Q | 0.2727 | likely_benign | 0.2362 | benign | -0.455 | Destabilizing | 1.0 | D | 0.652 | neutral | N | 0.479130692 | None | None | N |
E/R | 0.6097 | likely_pathogenic | 0.4885 | ambiguous | -0.09 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
E/S | 0.4023 | ambiguous | 0.3506 | ambiguous | -0.739 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
E/T | 0.4921 | ambiguous | 0.4277 | ambiguous | -0.526 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
E/V | 0.4927 | ambiguous | 0.431 | ambiguous | -0.138 | Destabilizing | 1.0 | D | 0.607 | neutral | N | 0.486474526 | None | None | N |
E/W | 0.9843 | likely_pathogenic | 0.9736 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
E/Y | 0.917 | likely_pathogenic | 0.8809 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.