Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20450 | 61573;61574;61575 | chr2:178590377;178590376;178590375 | chr2:179455104;179455103;179455102 |
N2AB | 18809 | 56650;56651;56652 | chr2:178590377;178590376;178590375 | chr2:179455104;179455103;179455102 |
N2A | 17882 | 53869;53870;53871 | chr2:178590377;178590376;178590375 | chr2:179455104;179455103;179455102 |
N2B | 11385 | 34378;34379;34380 | chr2:178590377;178590376;178590375 | chr2:179455104;179455103;179455102 |
Novex-1 | 11510 | 34753;34754;34755 | chr2:178590377;178590376;178590375 | chr2:179455104;179455103;179455102 |
Novex-2 | 11577 | 34954;34955;34956 | chr2:178590377;178590376;178590375 | chr2:179455104;179455103;179455102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.136 | N | 0.396 | 0.152 | 0.158396225186 | gnomAD-4.0.0 | 1.6623E-06 | None | None | None | None | N | None | 0 | 2.44451E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3998 | ambiguous | 0.3939 | ambiguous | -1.367 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
A/D | 0.8873 | likely_pathogenic | 0.8604 | pathogenic | -1.517 | Destabilizing | 0.934 | D | 0.701 | prob.neutral | N | 0.506995159 | None | None | N |
A/E | 0.7114 | likely_pathogenic | 0.6361 | pathogenic | -1.473 | Destabilizing | 0.842 | D | 0.704 | prob.neutral | None | None | None | None | N |
A/F | 0.5603 | ambiguous | 0.5087 | ambiguous | -0.982 | Destabilizing | 0.974 | D | 0.714 | prob.delet. | None | None | None | None | N |
A/G | 0.3824 | ambiguous | 0.3733 | ambiguous | -1.415 | Destabilizing | 0.801 | D | 0.61 | neutral | N | 0.482214144 | None | None | N |
A/H | 0.7646 | likely_pathogenic | 0.7358 | pathogenic | -1.422 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | N |
A/I | 0.3012 | likely_benign | 0.2634 | benign | -0.337 | Destabilizing | 0.728 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/K | 0.7978 | likely_pathogenic | 0.747 | pathogenic | -1.129 | Destabilizing | 0.842 | D | 0.699 | prob.neutral | None | None | None | None | N |
A/L | 0.3378 | likely_benign | 0.3096 | benign | -0.337 | Destabilizing | 0.525 | D | 0.638 | neutral | None | None | None | None | N |
A/M | 0.3271 | likely_benign | 0.3015 | benign | -0.567 | Destabilizing | 0.974 | D | 0.675 | neutral | None | None | None | None | N |
A/N | 0.6703 | likely_pathogenic | 0.6546 | pathogenic | -1.075 | Destabilizing | 0.949 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/P | 0.9864 | likely_pathogenic | 0.9878 | pathogenic | -0.549 | Destabilizing | 0.966 | D | 0.695 | prob.neutral | N | 0.466786882 | None | None | N |
A/Q | 0.5832 | likely_pathogenic | 0.5388 | ambiguous | -1.164 | Destabilizing | 0.974 | D | 0.707 | prob.neutral | None | None | None | None | N |
A/R | 0.7079 | likely_pathogenic | 0.6533 | pathogenic | -0.924 | Destabilizing | 0.974 | D | 0.7 | prob.neutral | None | None | None | None | N |
A/S | 0.1575 | likely_benign | 0.1494 | benign | -1.537 | Destabilizing | 0.136 | N | 0.396 | neutral | N | 0.430246529 | None | None | N |
A/T | 0.118 | likely_benign | 0.1097 | benign | -1.385 | Destabilizing | 0.051 | N | 0.404 | neutral | N | 0.416431869 | None | None | N |
A/V | 0.144 | likely_benign | 0.1282 | benign | -0.549 | Destabilizing | 0.005 | N | 0.185 | neutral | N | 0.324380139 | None | None | N |
A/W | 0.8967 | likely_pathogenic | 0.8801 | pathogenic | -1.345 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | N |
A/Y | 0.7104 | likely_pathogenic | 0.6726 | pathogenic | -0.911 | Destabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.