Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20455 | 61588;61589;61590 | chr2:178590362;178590361;178590360 | chr2:179455089;179455088;179455087 |
N2AB | 18814 | 56665;56666;56667 | chr2:178590362;178590361;178590360 | chr2:179455089;179455088;179455087 |
N2A | 17887 | 53884;53885;53886 | chr2:178590362;178590361;178590360 | chr2:179455089;179455088;179455087 |
N2B | 11390 | 34393;34394;34395 | chr2:178590362;178590361;178590360 | chr2:179455089;179455088;179455087 |
Novex-1 | 11515 | 34768;34769;34770 | chr2:178590362;178590361;178590360 | chr2:179455089;179455088;179455087 |
Novex-2 | 11582 | 34969;34970;34971 | chr2:178590362;178590361;178590360 | chr2:179455089;179455088;179455087 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1347430347 | None | 0.104 | N | 0.263 | 0.044 | 0.156986980423 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 1.18203E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1347430347 | None | 0.104 | N | 0.263 | 0.044 | 0.156986980423 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1347430347 | None | 0.104 | N | 0.263 | 0.044 | 0.156986980423 | gnomAD-4.0.0 | 2.63054E-05 | None | None | None | None | I | None | 9.65251E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 0.999 | N | 0.819 | 0.372 | 0.353761421236 | gnomAD-4.0.0 | 7.01211E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.13232E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3301 | likely_benign | 0.3498 | ambiguous | -0.299 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | N | 0.469092918 | None | None | I |
E/C | 0.9065 | likely_pathogenic | 0.9225 | pathogenic | 0.066 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/D | 0.2935 | likely_benign | 0.2672 | benign | -0.295 | Destabilizing | 0.104 | N | 0.263 | neutral | N | 0.461089511 | None | None | I |
E/F | 0.8573 | likely_pathogenic | 0.8751 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
E/G | 0.5665 | likely_pathogenic | 0.5647 | pathogenic | -0.496 | Destabilizing | 0.994 | D | 0.755 | deleterious | N | 0.514806565 | None | None | I |
E/H | 0.8307 | likely_pathogenic | 0.8392 | pathogenic | 0.109 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/I | 0.4087 | ambiguous | 0.4008 | ambiguous | 0.185 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
E/K | 0.5167 | ambiguous | 0.5019 | ambiguous | 0.584 | Stabilizing | 0.994 | D | 0.665 | neutral | N | 0.483214222 | None | None | I |
E/L | 0.5516 | ambiguous | 0.5419 | ambiguous | 0.185 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
E/M | 0.598 | likely_pathogenic | 0.6185 | pathogenic | 0.27 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
E/N | 0.6505 | likely_pathogenic | 0.6292 | pathogenic | 0.151 | Stabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | I |
E/P | 0.7258 | likely_pathogenic | 0.7506 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
E/Q | 0.3751 | ambiguous | 0.3905 | ambiguous | 0.19 | Stabilizing | 0.998 | D | 0.732 | prob.delet. | N | 0.442791751 | None | None | I |
E/R | 0.6939 | likely_pathogenic | 0.6946 | pathogenic | 0.74 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
E/S | 0.523 | ambiguous | 0.5219 | ambiguous | 0.017 | Stabilizing | 0.992 | D | 0.669 | neutral | None | None | None | None | I |
E/T | 0.4609 | ambiguous | 0.4619 | ambiguous | 0.19 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
E/V | 0.2597 | likely_benign | 0.2646 | benign | 0.044 | Stabilizing | 0.999 | D | 0.819 | deleterious | N | 0.430035885 | None | None | I |
E/W | 0.9597 | likely_pathogenic | 0.9675 | pathogenic | 0.038 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
E/Y | 0.8288 | likely_pathogenic | 0.8394 | pathogenic | 0.133 | Stabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.