Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20457 | 61594;61595;61596 | chr2:178590356;178590355;178590354 | chr2:179455083;179455082;179455081 |
N2AB | 18816 | 56671;56672;56673 | chr2:178590356;178590355;178590354 | chr2:179455083;179455082;179455081 |
N2A | 17889 | 53890;53891;53892 | chr2:178590356;178590355;178590354 | chr2:179455083;179455082;179455081 |
N2B | 11392 | 34399;34400;34401 | chr2:178590356;178590355;178590354 | chr2:179455083;179455082;179455081 |
Novex-1 | 11517 | 34774;34775;34776 | chr2:178590356;178590355;178590354 | chr2:179455083;179455082;179455081 |
Novex-2 | 11584 | 34975;34976;34977 | chr2:178590356;178590355;178590354 | chr2:179455083;179455082;179455081 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs541930965 | -0.475 | 0.067 | N | 0.422 | 0.251 | 0.268660756437 | gnomAD-2.1.1 | 3.69E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.71747E-04 | None | 0 | 0 | 0 |
E/A | rs541930965 | -0.475 | 0.067 | N | 0.422 | 0.251 | 0.268660756437 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14594E-04 | 0 |
E/A | rs541930965 | -0.475 | 0.067 | N | 0.422 | 0.251 | 0.268660756437 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/A | rs541930965 | -0.475 | 0.067 | N | 0.422 | 0.251 | 0.268660756437 | gnomAD-4.0.0 | 1.3328E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.53961E-04 | 0 |
E/K | None | None | 0.958 | N | 0.584 | 0.295 | 0.300110245524 | gnomAD-4.0.0 | 2.10783E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.74246E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2544 | likely_benign | 0.2864 | benign | -0.349 | Destabilizing | 0.067 | N | 0.422 | neutral | N | 0.472850042 | None | None | I |
E/C | 0.9035 | likely_pathogenic | 0.9186 | pathogenic | -0.143 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/D | 0.1568 | likely_benign | 0.1595 | benign | -0.351 | Destabilizing | 0.979 | D | 0.529 | neutral | N | 0.515884001 | None | None | I |
E/F | 0.8371 | likely_pathogenic | 0.8413 | pathogenic | -0.201 | Destabilizing | 0.995 | D | 0.724 | prob.delet. | None | None | None | None | I |
E/G | 0.3702 | ambiguous | 0.3871 | ambiguous | -0.55 | Destabilizing | 0.919 | D | 0.625 | neutral | N | 0.502626544 | None | None | I |
E/H | 0.7223 | likely_pathogenic | 0.7321 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
E/I | 0.438 | ambiguous | 0.4679 | ambiguous | 0.145 | Stabilizing | 0.991 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/K | 0.3297 | likely_benign | 0.3278 | benign | 0.21 | Stabilizing | 0.958 | D | 0.584 | neutral | N | 0.497316883 | None | None | I |
E/L | 0.49 | ambiguous | 0.5075 | ambiguous | 0.145 | Stabilizing | 0.982 | D | 0.648 | neutral | None | None | None | None | I |
E/M | 0.54 | ambiguous | 0.5781 | pathogenic | 0.154 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/N | 0.398 | ambiguous | 0.4043 | ambiguous | -0.059 | Destabilizing | 0.995 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/P | 0.4801 | ambiguous | 0.5089 | ambiguous | 0.001 | Stabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/Q | 0.2317 | likely_benign | 0.2487 | benign | -0.025 | Destabilizing | 0.994 | D | 0.674 | neutral | N | 0.470141017 | None | None | I |
E/R | 0.5234 | ambiguous | 0.5396 | ambiguous | 0.485 | Stabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/S | 0.3422 | ambiguous | 0.3677 | ambiguous | -0.249 | Destabilizing | 0.938 | D | 0.571 | neutral | None | None | None | None | I |
E/T | 0.3936 | ambiguous | 0.4339 | ambiguous | -0.087 | Destabilizing | 0.991 | D | 0.66 | neutral | None | None | None | None | I |
E/V | 0.2904 | likely_benign | 0.3219 | benign | 0.001 | Stabilizing | 0.976 | D | 0.624 | neutral | N | 0.481777265 | None | None | I |
E/W | 0.9517 | likely_pathogenic | 0.9547 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
E/Y | 0.7616 | likely_pathogenic | 0.7651 | pathogenic | 0.042 | Stabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.