Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2045761594;61595;61596 chr2:178590356;178590355;178590354chr2:179455083;179455082;179455081
N2AB1881656671;56672;56673 chr2:178590356;178590355;178590354chr2:179455083;179455082;179455081
N2A1788953890;53891;53892 chr2:178590356;178590355;178590354chr2:179455083;179455082;179455081
N2B1139234399;34400;34401 chr2:178590356;178590355;178590354chr2:179455083;179455082;179455081
Novex-11151734774;34775;34776 chr2:178590356;178590355;178590354chr2:179455083;179455082;179455081
Novex-21158434975;34976;34977 chr2:178590356;178590355;178590354chr2:179455083;179455082;179455081
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Fn3-36
  • Domain position: 87
  • Structural Position: 119
  • Q(SASA): 0.5488
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/A rs541930965 -0.475 0.067 N 0.422 0.251 0.268660756437 gnomAD-2.1.1 3.69E-05 None None None None I None 0 0 None 0 0 None 3.71747E-04 None 0 0 0
E/A rs541930965 -0.475 0.067 N 0.422 0.251 0.268660756437 gnomAD-3.1.2 1.32E-05 None None None None I None 0 0 0 0 0 None 0 0 0 4.14594E-04 0
E/A rs541930965 -0.475 0.067 N 0.422 0.251 0.268660756437 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 0 None None None 1E-03 None
E/A rs541930965 -0.475 0.067 N 0.422 0.251 0.268660756437 gnomAD-4.0.0 1.3328E-05 None None None None I None 0 0 None 0 0 None 0 0 0 2.53961E-04 0
E/K None None 0.958 N 0.584 0.295 0.300110245524 gnomAD-4.0.0 2.10783E-06 None None None None I None 0 0 None 0 0 None 0 0 2.74246E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.2544 likely_benign 0.2864 benign -0.349 Destabilizing 0.067 N 0.422 neutral N 0.472850042 None None I
E/C 0.9035 likely_pathogenic 0.9186 pathogenic -0.143 Destabilizing 0.999 D 0.731 prob.delet. None None None None I
E/D 0.1568 likely_benign 0.1595 benign -0.351 Destabilizing 0.979 D 0.529 neutral N 0.515884001 None None I
E/F 0.8371 likely_pathogenic 0.8413 pathogenic -0.201 Destabilizing 0.995 D 0.724 prob.delet. None None None None I
E/G 0.3702 ambiguous 0.3871 ambiguous -0.55 Destabilizing 0.919 D 0.625 neutral N 0.502626544 None None I
E/H 0.7223 likely_pathogenic 0.7321 pathogenic 0.097 Stabilizing 1.0 D 0.633 neutral None None None None I
E/I 0.438 ambiguous 0.4679 ambiguous 0.145 Stabilizing 0.991 D 0.715 prob.delet. None None None None I
E/K 0.3297 likely_benign 0.3278 benign 0.21 Stabilizing 0.958 D 0.584 neutral N 0.497316883 None None I
E/L 0.49 ambiguous 0.5075 ambiguous 0.145 Stabilizing 0.982 D 0.648 neutral None None None None I
E/M 0.54 ambiguous 0.5781 pathogenic 0.154 Stabilizing 1.0 D 0.693 prob.neutral None None None None I
E/N 0.398 ambiguous 0.4043 ambiguous -0.059 Destabilizing 0.995 D 0.679 prob.neutral None None None None I
E/P 0.4801 ambiguous 0.5089 ambiguous 0.001 Stabilizing 0.995 D 0.695 prob.neutral None None None None I
E/Q 0.2317 likely_benign 0.2487 benign -0.025 Destabilizing 0.994 D 0.674 neutral N 0.470141017 None None I
E/R 0.5234 ambiguous 0.5396 ambiguous 0.485 Stabilizing 0.995 D 0.677 prob.neutral None None None None I
E/S 0.3422 ambiguous 0.3677 ambiguous -0.249 Destabilizing 0.938 D 0.571 neutral None None None None I
E/T 0.3936 ambiguous 0.4339 ambiguous -0.087 Destabilizing 0.991 D 0.66 neutral None None None None I
E/V 0.2904 likely_benign 0.3219 benign 0.001 Stabilizing 0.976 D 0.624 neutral N 0.481777265 None None I
E/W 0.9517 likely_pathogenic 0.9547 pathogenic -0.052 Destabilizing 1.0 D 0.753 deleterious None None None None I
E/Y 0.7616 likely_pathogenic 0.7651 pathogenic 0.042 Stabilizing 0.998 D 0.715 prob.delet. None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.