Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20496 | 61711;61712;61713 | chr2:178590239;178590238;178590237 | chr2:179454966;179454965;179454964 |
N2AB | 18855 | 56788;56789;56790 | chr2:178590239;178590238;178590237 | chr2:179454966;179454965;179454964 |
N2A | 17928 | 54007;54008;54009 | chr2:178590239;178590238;178590237 | chr2:179454966;179454965;179454964 |
N2B | 11431 | 34516;34517;34518 | chr2:178590239;178590238;178590237 | chr2:179454966;179454965;179454964 |
Novex-1 | 11556 | 34891;34892;34893 | chr2:178590239;178590238;178590237 | chr2:179454966;179454965;179454964 |
Novex-2 | 11623 | 35092;35093;35094 | chr2:178590239;178590238;178590237 | chr2:179454966;179454965;179454964 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.989 | N | 0.692 | 0.305 | 0.554801812059 | gnomAD-4.0.0 | 1.65244E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.54059E-05 | 0 |
I/M | rs886042497 | None | 0.989 | N | 0.657 | 0.288 | 0.606648057779 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs886042497 | None | 0.989 | N | 0.657 | 0.288 | 0.606648057779 | gnomAD-4.0.0 | 7.54018E-06 | None | None | None | None | N | None | 0 | 3.45686E-05 | None | 0 | 0 | None | 0 | 0 | 8.55445E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9801 | likely_pathogenic | 0.9867 | pathogenic | -2.411 | Highly Destabilizing | 0.97 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/C | 0.9685 | likely_pathogenic | 0.9771 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
I/D | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -3.066 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
I/E | 0.9983 | likely_pathogenic | 0.9988 | pathogenic | -2.786 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
I/F | 0.5668 | likely_pathogenic | 0.6296 | pathogenic | -1.523 | Destabilizing | 0.989 | D | 0.692 | prob.neutral | N | 0.43559642 | None | None | N |
I/G | 0.9957 | likely_pathogenic | 0.9971 | pathogenic | -2.949 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
I/H | 0.9956 | likely_pathogenic | 0.9964 | pathogenic | -2.43 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
I/K | 0.996 | likely_pathogenic | 0.9966 | pathogenic | -1.887 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
I/L | 0.1685 | likely_benign | 0.1826 | benign | -0.814 | Destabilizing | 0.031 | N | 0.275 | neutral | N | 0.363541534 | None | None | N |
I/M | 0.325 | likely_benign | 0.3621 | ambiguous | -0.803 | Destabilizing | 0.989 | D | 0.657 | neutral | N | 0.485150954 | None | None | N |
I/N | 0.9912 | likely_pathogenic | 0.9925 | pathogenic | -2.473 | Highly Destabilizing | 0.998 | D | 0.853 | deleterious | N | 0.499330494 | None | None | N |
I/P | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -1.335 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
I/Q | 0.9957 | likely_pathogenic | 0.9964 | pathogenic | -2.229 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
I/R | 0.9941 | likely_pathogenic | 0.995 | pathogenic | -1.847 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
I/S | 0.9913 | likely_pathogenic | 0.9935 | pathogenic | -3.049 | Highly Destabilizing | 0.994 | D | 0.812 | deleterious | N | 0.5106868 | None | None | N |
I/T | 0.9906 | likely_pathogenic | 0.9935 | pathogenic | -2.612 | Highly Destabilizing | 0.961 | D | 0.739 | prob.delet. | N | 0.51043331 | None | None | N |
I/V | 0.2084 | likely_benign | 0.2617 | benign | -1.335 | Destabilizing | 0.248 | N | 0.237 | neutral | N | 0.472760447 | None | None | N |
I/W | 0.9924 | likely_pathogenic | 0.9942 | pathogenic | -1.864 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
I/Y | 0.9586 | likely_pathogenic | 0.966 | pathogenic | -1.57 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.