Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20500 | 61723;61724;61725 | chr2:178590227;178590226;178590225 | chr2:179454954;179454953;179454952 |
N2AB | 18859 | 56800;56801;56802 | chr2:178590227;178590226;178590225 | chr2:179454954;179454953;179454952 |
N2A | 17932 | 54019;54020;54021 | chr2:178590227;178590226;178590225 | chr2:179454954;179454953;179454952 |
N2B | 11435 | 34528;34529;34530 | chr2:178590227;178590226;178590225 | chr2:179454954;179454953;179454952 |
Novex-1 | 11560 | 34903;34904;34905 | chr2:178590227;178590226;178590225 | chr2:179454954;179454953;179454952 |
Novex-2 | 11627 | 35104;35105;35106 | chr2:178590227;178590226;178590225 | chr2:179454954;179454953;179454952 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.369 | D | 0.545 | 0.44 | 0.546521485473 | gnomAD-4.0.0 | 1.63546E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92754E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7833 | likely_pathogenic | 0.8279 | pathogenic | -1.562 | Destabilizing | 0.892 | D | 0.577 | neutral | N | 0.480350928 | None | None | N |
V/C | 0.9361 | likely_pathogenic | 0.9368 | pathogenic | -1.039 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
V/D | 0.9968 | likely_pathogenic | 0.9985 | pathogenic | -1.61 | Destabilizing | 0.994 | D | 0.843 | deleterious | D | 0.598766493 | None | None | N |
V/E | 0.9884 | likely_pathogenic | 0.9937 | pathogenic | -1.541 | Destabilizing | 0.996 | D | 0.827 | deleterious | None | None | None | None | N |
V/F | 0.8204 | likely_pathogenic | 0.8698 | pathogenic | -1.053 | Destabilizing | 0.967 | D | 0.812 | deleterious | D | 0.570011229 | None | None | N |
V/G | 0.8611 | likely_pathogenic | 0.9004 | pathogenic | -1.945 | Destabilizing | 0.983 | D | 0.84 | deleterious | D | 0.573228381 | None | None | N |
V/H | 0.9965 | likely_pathogenic | 0.9979 | pathogenic | -1.54 | Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
V/I | 0.1244 | likely_benign | 0.1275 | benign | -0.58 | Destabilizing | 0.025 | N | 0.196 | neutral | N | 0.459068792 | None | None | N |
V/K | 0.9907 | likely_pathogenic | 0.995 | pathogenic | -1.483 | Destabilizing | 0.987 | D | 0.827 | deleterious | None | None | None | None | N |
V/L | 0.6832 | likely_pathogenic | 0.763 | pathogenic | -0.58 | Destabilizing | 0.369 | N | 0.545 | neutral | D | 0.531015493 | None | None | N |
V/M | 0.7076 | likely_pathogenic | 0.7888 | pathogenic | -0.479 | Destabilizing | 0.975 | D | 0.743 | deleterious | None | None | None | None | N |
V/N | 0.9896 | likely_pathogenic | 0.9943 | pathogenic | -1.394 | Destabilizing | 0.996 | D | 0.863 | deleterious | None | None | None | None | N |
V/P | 0.9891 | likely_pathogenic | 0.9926 | pathogenic | -0.874 | Destabilizing | 0.996 | D | 0.827 | deleterious | None | None | None | None | N |
V/Q | 0.9857 | likely_pathogenic | 0.9915 | pathogenic | -1.448 | Destabilizing | 0.996 | D | 0.842 | deleterious | None | None | None | None | N |
V/R | 0.9836 | likely_pathogenic | 0.9904 | pathogenic | -1.059 | Destabilizing | 0.996 | D | 0.861 | deleterious | None | None | None | None | N |
V/S | 0.9408 | likely_pathogenic | 0.9603 | pathogenic | -1.907 | Destabilizing | 0.987 | D | 0.818 | deleterious | None | None | None | None | N |
V/T | 0.8601 | likely_pathogenic | 0.8997 | pathogenic | -1.717 | Destabilizing | 0.916 | D | 0.672 | neutral | None | None | None | None | N |
V/W | 0.9963 | likely_pathogenic | 0.9975 | pathogenic | -1.363 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
V/Y | 0.9821 | likely_pathogenic | 0.9865 | pathogenic | -1.029 | Destabilizing | 0.987 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.