Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20509 | 61750;61751;61752 | chr2:178590200;178590199;178590198 | chr2:179454927;179454926;179454925 |
N2AB | 18868 | 56827;56828;56829 | chr2:178590200;178590199;178590198 | chr2:179454927;179454926;179454925 |
N2A | 17941 | 54046;54047;54048 | chr2:178590200;178590199;178590198 | chr2:179454927;179454926;179454925 |
N2B | 11444 | 34555;34556;34557 | chr2:178590200;178590199;178590198 | chr2:179454927;179454926;179454925 |
Novex-1 | 11569 | 34930;34931;34932 | chr2:178590200;178590199;178590198 | chr2:179454927;179454926;179454925 |
Novex-2 | 11636 | 35131;35132;35133 | chr2:178590200;178590199;178590198 | chr2:179454927;179454926;179454925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.669 | N | 0.57 | 0.093 | 0.180583059064 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0938 | likely_benign | 0.1 | benign | -0.879 | Destabilizing | 0.012 | N | 0.299 | neutral | N | 0.487124815 | None | None | N |
T/C | 0.3155 | likely_benign | 0.3164 | benign | -0.477 | Destabilizing | 0.993 | D | 0.571 | neutral | None | None | None | None | N |
T/D | 0.4677 | ambiguous | 0.5471 | ambiguous | 0.094 | Stabilizing | 0.974 | D | 0.58 | neutral | None | None | None | None | N |
T/E | 0.3333 | likely_benign | 0.3802 | ambiguous | 0.111 | Stabilizing | 0.949 | D | 0.569 | neutral | None | None | None | None | N |
T/F | 0.2021 | likely_benign | 0.2025 | benign | -0.929 | Destabilizing | 0.949 | D | 0.619 | neutral | None | None | None | None | N |
T/G | 0.3012 | likely_benign | 0.3317 | benign | -1.15 | Destabilizing | 0.728 | D | 0.588 | neutral | None | None | None | None | N |
T/H | 0.2356 | likely_benign | 0.2483 | benign | -1.354 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
T/I | 0.1156 | likely_benign | 0.1131 | benign | -0.245 | Destabilizing | 0.051 | N | 0.317 | neutral | N | 0.511126834 | None | None | N |
T/K | 0.2634 | likely_benign | 0.3107 | benign | -0.554 | Destabilizing | 0.949 | D | 0.569 | neutral | None | None | None | None | N |
T/L | 0.0889 | likely_benign | 0.0874 | benign | -0.245 | Destabilizing | 0.016 | N | 0.313 | neutral | None | None | None | None | N |
T/M | 0.0944 | likely_benign | 0.0925 | benign | -0.044 | Destabilizing | 0.949 | D | 0.601 | neutral | None | None | None | None | N |
T/N | 0.1313 | likely_benign | 0.1468 | benign | -0.529 | Destabilizing | 0.966 | D | 0.577 | neutral | N | 0.495709643 | None | None | N |
T/P | 0.6804 | likely_pathogenic | 0.7545 | pathogenic | -0.424 | Destabilizing | 0.966 | D | 0.591 | neutral | D | 0.537286978 | None | None | N |
T/Q | 0.2301 | likely_benign | 0.2463 | benign | -0.638 | Destabilizing | 0.974 | D | 0.593 | neutral | None | None | None | None | N |
T/R | 0.2142 | likely_benign | 0.254 | benign | -0.386 | Destabilizing | 0.974 | D | 0.591 | neutral | None | None | None | None | N |
T/S | 0.1013 | likely_benign | 0.1054 | benign | -0.873 | Destabilizing | 0.669 | D | 0.57 | neutral | N | 0.503040494 | None | None | N |
T/V | 0.1089 | likely_benign | 0.1075 | benign | -0.424 | Destabilizing | 0.525 | D | 0.554 | neutral | None | None | None | None | N |
T/W | 0.6313 | likely_pathogenic | 0.6344 | pathogenic | -0.849 | Destabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | N |
T/Y | 0.2763 | likely_benign | 0.278 | benign | -0.607 | Destabilizing | 0.991 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.