Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20511 | 61756;61757;61758 | chr2:178590194;178590193;178590192 | chr2:179454921;179454920;179454919 |
N2AB | 18870 | 56833;56834;56835 | chr2:178590194;178590193;178590192 | chr2:179454921;179454920;179454919 |
N2A | 17943 | 54052;54053;54054 | chr2:178590194;178590193;178590192 | chr2:179454921;179454920;179454919 |
N2B | 11446 | 34561;34562;34563 | chr2:178590194;178590193;178590192 | chr2:179454921;179454920;179454919 |
Novex-1 | 11571 | 34936;34937;34938 | chr2:178590194;178590193;178590192 | chr2:179454921;179454920;179454919 |
Novex-2 | 11638 | 35137;35138;35139 | chr2:178590194;178590193;178590192 | chr2:179454921;179454920;179454919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.151 | 0.112 | 0.0846915920261 | gnomAD-4.0.0 | 6.85972E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00859E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0933 | likely_benign | 0.0889 | benign | -1.247 | Destabilizing | None | N | 0.151 | neutral | N | 0.510157602 | None | None | I |
T/C | 0.2738 | likely_benign | 0.2494 | benign | -0.691 | Destabilizing | 0.356 | N | 0.529 | neutral | None | None | None | None | I |
T/D | 0.5245 | ambiguous | 0.5244 | ambiguous | -0.555 | Destabilizing | 0.016 | N | 0.47 | neutral | None | None | None | None | I |
T/E | 0.338 | likely_benign | 0.3576 | ambiguous | -0.395 | Destabilizing | 0.016 | N | 0.473 | neutral | None | None | None | None | I |
T/F | 0.2296 | likely_benign | 0.221 | benign | -1.046 | Destabilizing | None | N | 0.283 | neutral | None | None | None | None | I |
T/G | 0.2037 | likely_benign | 0.1937 | benign | -1.625 | Destabilizing | 0.007 | N | 0.419 | neutral | None | None | None | None | I |
T/H | 0.2698 | likely_benign | 0.2592 | benign | -1.651 | Destabilizing | 0.356 | N | 0.559 | neutral | None | None | None | None | I |
T/I | 0.2046 | likely_benign | 0.2081 | benign | -0.269 | Destabilizing | 0.012 | N | 0.463 | neutral | N | 0.495900226 | None | None | I |
T/K | 0.3179 | likely_benign | 0.348 | ambiguous | -0.207 | Destabilizing | 0.016 | N | 0.465 | neutral | None | None | None | None | I |
T/L | 0.1031 | likely_benign | 0.0947 | benign | -0.269 | Destabilizing | 0.007 | N | 0.413 | neutral | None | None | None | None | I |
T/M | 0.0923 | likely_benign | 0.0821 | benign | -0.207 | Destabilizing | 0.356 | N | 0.532 | neutral | None | None | None | None | I |
T/N | 0.1305 | likely_benign | 0.1241 | benign | -0.65 | Destabilizing | 0.012 | N | 0.376 | neutral | N | 0.455616435 | None | None | I |
T/P | 0.8626 | likely_pathogenic | 0.8913 | pathogenic | -0.564 | Destabilizing | 0.055 | N | 0.525 | neutral | N | 0.47874712 | None | None | I |
T/Q | 0.2177 | likely_benign | 0.2246 | benign | -0.554 | Destabilizing | 0.072 | N | 0.52 | neutral | None | None | None | None | I |
T/R | 0.268 | likely_benign | 0.3056 | benign | -0.349 | Destabilizing | 0.072 | N | 0.53 | neutral | None | None | None | None | I |
T/S | 0.085 | likely_benign | 0.0779 | benign | -1.057 | Destabilizing | None | N | 0.134 | neutral | N | 0.441932455 | None | None | I |
T/V | 0.1663 | likely_benign | 0.1595 | benign | -0.564 | Destabilizing | 0.016 | N | 0.395 | neutral | None | None | None | None | I |
T/W | 0.5354 | ambiguous | 0.5042 | ambiguous | -1.006 | Destabilizing | 0.864 | D | 0.547 | neutral | None | None | None | None | I |
T/Y | 0.251 | likely_benign | 0.2319 | benign | -0.681 | Destabilizing | 0.038 | N | 0.544 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.