Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20512 | 61759;61760;61761 | chr2:178590191;178590190;178590189 | chr2:179454918;179454917;179454916 |
N2AB | 18871 | 56836;56837;56838 | chr2:178590191;178590190;178590189 | chr2:179454918;179454917;179454916 |
N2A | 17944 | 54055;54056;54057 | chr2:178590191;178590190;178590189 | chr2:179454918;179454917;179454916 |
N2B | 11447 | 34564;34565;34566 | chr2:178590191;178590190;178590189 | chr2:179454918;179454917;179454916 |
Novex-1 | 11572 | 34939;34940;34941 | chr2:178590191;178590190;178590189 | chr2:179454918;179454917;179454916 |
Novex-2 | 11639 | 35140;35141;35142 | chr2:178590191;178590190;178590189 | chr2:179454918;179454917;179454916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.993 | N | 0.671 | 0.339 | 0.199424873507 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | rs2049906608 | None | 0.235 | N | 0.379 | 0.163 | 0.198526703765 | gnomAD-4.0.0 | 1.60064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77963E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9146 | likely_pathogenic | 0.9508 | pathogenic | -1.072 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
K/C | 0.8537 | likely_pathogenic | 0.8948 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
K/D | 0.9838 | likely_pathogenic | 0.9911 | pathogenic | -0.331 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
K/E | 0.8342 | likely_pathogenic | 0.9034 | pathogenic | -0.17 | Destabilizing | 0.977 | D | 0.486 | neutral | D | 0.530437582 | None | None | N |
K/F | 0.9453 | likely_pathogenic | 0.9576 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
K/G | 0.9543 | likely_pathogenic | 0.9738 | pathogenic | -1.47 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/H | 0.6075 | likely_pathogenic | 0.6499 | pathogenic | -1.789 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
K/I | 0.777 | likely_pathogenic | 0.864 | pathogenic | -0.012 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
K/L | 0.7806 | likely_pathogenic | 0.8491 | pathogenic | -0.012 | Destabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/M | 0.5969 | likely_pathogenic | 0.705 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.794 | deleterious | N | 0.507306897 | None | None | N |
K/N | 0.9388 | likely_pathogenic | 0.9655 | pathogenic | -0.764 | Destabilizing | 0.993 | D | 0.671 | neutral | N | 0.495950592 | None | None | N |
K/P | 0.9953 | likely_pathogenic | 0.9966 | pathogenic | -0.338 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
K/Q | 0.4616 | ambiguous | 0.5467 | ambiguous | -0.787 | Destabilizing | 0.993 | D | 0.655 | neutral | N | 0.503179067 | None | None | N |
K/R | 0.0873 | likely_benign | 0.084 | benign | -0.689 | Destabilizing | 0.235 | N | 0.379 | neutral | N | 0.490363907 | None | None | N |
K/S | 0.9379 | likely_pathogenic | 0.9641 | pathogenic | -1.556 | Destabilizing | 0.983 | D | 0.564 | neutral | None | None | None | None | N |
K/T | 0.84 | likely_pathogenic | 0.9117 | pathogenic | -1.159 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | N | 0.511826348 | None | None | N |
K/V | 0.7232 | likely_pathogenic | 0.8075 | pathogenic | -0.338 | Destabilizing | 0.998 | D | 0.778 | deleterious | None | None | None | None | N |
K/W | 0.9248 | likely_pathogenic | 0.9266 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
K/Y | 0.8422 | likely_pathogenic | 0.8681 | pathogenic | -0.284 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.