Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20515 | 61768;61769;61770 | chr2:178590182;178590181;178590180 | chr2:179454909;179454908;179454907 |
N2AB | 18874 | 56845;56846;56847 | chr2:178590182;178590181;178590180 | chr2:179454909;179454908;179454907 |
N2A | 17947 | 54064;54065;54066 | chr2:178590182;178590181;178590180 | chr2:179454909;179454908;179454907 |
N2B | 11450 | 34573;34574;34575 | chr2:178590182;178590181;178590180 | chr2:179454909;179454908;179454907 |
Novex-1 | 11575 | 34948;34949;34950 | chr2:178590182;178590181;178590180 | chr2:179454909;179454908;179454907 |
Novex-2 | 11642 | 35149;35150;35151 | chr2:178590182;178590181;178590180 | chr2:179454909;179454908;179454907 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.801 | N | 0.357 | 0.228 | 0.225215365344 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2836 | likely_benign | 0.2757 | benign | 0.031 | Stabilizing | 0.525 | D | 0.375 | neutral | None | None | None | None | N |
K/C | 0.5799 | likely_pathogenic | 0.5245 | ambiguous | -0.342 | Destabilizing | 0.998 | D | 0.358 | neutral | None | None | None | None | N |
K/D | 0.4446 | ambiguous | 0.4556 | ambiguous | 0.071 | Stabilizing | 0.842 | D | 0.388 | neutral | None | None | None | None | N |
K/E | 0.154 | likely_benign | 0.1596 | benign | 0.086 | Stabilizing | 0.801 | D | 0.325 | neutral | N | 0.449075511 | None | None | N |
K/F | 0.7167 | likely_pathogenic | 0.696 | pathogenic | -0.181 | Destabilizing | 0.991 | D | 0.365 | neutral | None | None | None | None | N |
K/G | 0.4171 | ambiguous | 0.4137 | ambiguous | -0.161 | Destabilizing | 0.842 | D | 0.347 | neutral | None | None | None | None | N |
K/H | 0.2404 | likely_benign | 0.2172 | benign | -0.333 | Destabilizing | 0.974 | D | 0.351 | neutral | None | None | None | None | N |
K/I | 0.2956 | likely_benign | 0.2868 | benign | 0.455 | Stabilizing | 0.934 | D | 0.391 | neutral | N | 0.482478795 | None | None | N |
K/L | 0.3295 | likely_benign | 0.3257 | benign | 0.455 | Stabilizing | 0.842 | D | 0.385 | neutral | None | None | None | None | N |
K/M | 0.2109 | likely_benign | 0.2096 | benign | 0.114 | Stabilizing | 0.991 | D | 0.351 | neutral | None | None | None | None | N |
K/N | 0.2772 | likely_benign | 0.2801 | benign | 0.093 | Stabilizing | 0.801 | D | 0.317 | neutral | N | 0.494349227 | None | None | N |
K/P | 0.884 | likely_pathogenic | 0.8921 | pathogenic | 0.341 | Stabilizing | 0.974 | D | 0.338 | neutral | None | None | None | None | N |
K/Q | 0.1111 | likely_benign | 0.1065 | benign | -0.027 | Destabilizing | 0.801 | D | 0.357 | neutral | N | 0.425737291 | None | None | N |
K/R | 0.078 | likely_benign | 0.0742 | benign | -0.048 | Destabilizing | 0.012 | N | 0.273 | neutral | N | 0.419390109 | None | None | N |
K/S | 0.3312 | likely_benign | 0.3301 | benign | -0.372 | Destabilizing | 0.172 | N | 0.289 | neutral | None | None | None | None | N |
K/T | 0.1544 | likely_benign | 0.1547 | benign | -0.208 | Destabilizing | 0.022 | N | 0.231 | neutral | N | 0.463199601 | None | None | N |
K/V | 0.2656 | likely_benign | 0.2522 | benign | 0.341 | Stabilizing | 0.842 | D | 0.385 | neutral | None | None | None | None | N |
K/W | 0.7636 | likely_pathogenic | 0.7215 | pathogenic | -0.233 | Destabilizing | 0.998 | D | 0.392 | neutral | None | None | None | None | N |
K/Y | 0.5833 | likely_pathogenic | 0.549 | ambiguous | 0.127 | Stabilizing | 0.991 | D | 0.371 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.