Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20518 | 61777;61778;61779 | chr2:178590173;178590172;178590171 | chr2:179454900;179454899;179454898 |
N2AB | 18877 | 56854;56855;56856 | chr2:178590173;178590172;178590171 | chr2:179454900;179454899;179454898 |
N2A | 17950 | 54073;54074;54075 | chr2:178590173;178590172;178590171 | chr2:179454900;179454899;179454898 |
N2B | 11453 | 34582;34583;34584 | chr2:178590173;178590172;178590171 | chr2:179454900;179454899;179454898 |
Novex-1 | 11578 | 34957;34958;34959 | chr2:178590173;178590172;178590171 | chr2:179454900;179454899;179454898 |
Novex-2 | 11645 | 35158;35159;35160 | chr2:178590173;178590172;178590171 | chr2:179454900;179454899;179454898 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1223901169 | -0.04 | 0.029 | N | 0.267 | 0.067 | 0.261217442401 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11957E-04 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1223901169 | -0.04 | 0.029 | N | 0.267 | 0.067 | 0.261217442401 | gnomAD-4.0.0 | 4.78536E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.33472E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.087 | likely_benign | 0.0965 | benign | -0.599 | Destabilizing | None | N | 0.135 | neutral | N | 0.454249257 | None | None | N |
V/C | 0.4396 | ambiguous | 0.4543 | ambiguous | -0.93 | Destabilizing | 0.676 | D | 0.344 | neutral | None | None | None | None | N |
V/D | 0.1524 | likely_benign | 0.1779 | benign | -0.574 | Destabilizing | 0.012 | N | 0.403 | neutral | N | 0.429430957 | None | None | N |
V/E | 0.1395 | likely_benign | 0.1494 | benign | -0.638 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
V/F | 0.1264 | likely_benign | 0.1257 | benign | -0.636 | Destabilizing | 0.295 | N | 0.339 | neutral | N | 0.517031299 | None | None | N |
V/G | 0.0875 | likely_benign | 0.1014 | benign | -0.747 | Destabilizing | None | N | 0.24 | neutral | N | 0.457252277 | None | None | N |
V/H | 0.28 | likely_benign | 0.298 | benign | -0.081 | Destabilizing | 0.356 | N | 0.377 | neutral | None | None | None | None | N |
V/I | 0.0787 | likely_benign | 0.0756 | benign | -0.328 | Destabilizing | 0.029 | N | 0.267 | neutral | N | 0.484900238 | None | None | N |
V/K | 0.1803 | likely_benign | 0.1993 | benign | -0.675 | Destabilizing | 0.072 | N | 0.387 | neutral | None | None | None | None | N |
V/L | 0.1001 | likely_benign | 0.0991 | benign | -0.328 | Destabilizing | 0.012 | N | 0.277 | neutral | N | 0.460484583 | None | None | N |
V/M | 0.1159 | likely_benign | 0.11 | benign | -0.673 | Destabilizing | 0.356 | N | 0.303 | neutral | None | None | None | None | N |
V/N | 0.1082 | likely_benign | 0.1247 | benign | -0.623 | Destabilizing | 0.001 | N | 0.266 | neutral | None | None | None | None | N |
V/P | 0.1611 | likely_benign | 0.188 | benign | -0.387 | Destabilizing | 0.136 | N | 0.411 | neutral | None | None | None | None | N |
V/Q | 0.1521 | likely_benign | 0.1617 | benign | -0.784 | Destabilizing | 0.072 | N | 0.4 | neutral | None | None | None | None | N |
V/R | 0.191 | likely_benign | 0.2104 | benign | -0.163 | Destabilizing | 0.072 | N | 0.399 | neutral | None | None | None | None | N |
V/S | 0.0858 | likely_benign | 0.0985 | benign | -0.964 | Destabilizing | 0.016 | N | 0.362 | neutral | None | None | None | None | N |
V/T | 0.0914 | likely_benign | 0.0988 | benign | -0.925 | Destabilizing | None | N | 0.162 | neutral | None | None | None | None | N |
V/W | 0.6452 | likely_pathogenic | 0.632 | pathogenic | -0.721 | Destabilizing | 0.864 | D | 0.39 | neutral | None | None | None | None | N |
V/Y | 0.3529 | ambiguous | 0.3544 | ambiguous | -0.454 | Destabilizing | 0.356 | N | 0.341 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.