Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20521 | 61786;61787;61788 | chr2:178590164;178590163;178590162 | chr2:179454891;179454890;179454889 |
N2AB | 18880 | 56863;56864;56865 | chr2:178590164;178590163;178590162 | chr2:179454891;179454890;179454889 |
N2A | 17953 | 54082;54083;54084 | chr2:178590164;178590163;178590162 | chr2:179454891;179454890;179454889 |
N2B | 11456 | 34591;34592;34593 | chr2:178590164;178590163;178590162 | chr2:179454891;179454890;179454889 |
Novex-1 | 11581 | 34966;34967;34968 | chr2:178590164;178590163;178590162 | chr2:179454891;179454890;179454889 |
Novex-2 | 11648 | 35167;35168;35169 | chr2:178590164;178590163;178590162 | chr2:179454891;179454890;179454889 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2049901780 | None | 0.885 | N | 0.471 | 0.159 | 0.206339911435 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs2049901780 | None | 0.885 | N | 0.471 | 0.159 | 0.206339911435 | gnomAD-4.0.0 | 6.57652E-06 | None | None | None | None | I | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | None | None | 0.1 | N | 0.321 | 0.076 | 0.115124310173 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2871 | likely_benign | 0.2944 | benign | -0.037 | Destabilizing | 0.953 | D | 0.439 | neutral | None | None | None | None | I |
K/C | 0.7193 | likely_pathogenic | 0.7207 | pathogenic | -0.549 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | I |
K/D | 0.3392 | likely_benign | 0.3458 | ambiguous | -0.415 | Destabilizing | 0.91 | D | 0.422 | neutral | None | None | None | None | I |
K/E | 0.1538 | likely_benign | 0.1603 | benign | -0.434 | Destabilizing | 0.885 | D | 0.471 | neutral | N | 0.44783692 | None | None | I |
K/F | 0.8273 | likely_pathogenic | 0.8394 | pathogenic | -0.42 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | I |
K/G | 0.3048 | likely_benign | 0.3273 | benign | -0.137 | Destabilizing | 0.91 | D | 0.433 | neutral | None | None | None | None | I |
K/H | 0.334 | likely_benign | 0.3431 | ambiguous | -0.188 | Destabilizing | 0.993 | D | 0.455 | neutral | None | None | None | None | I |
K/I | 0.4533 | ambiguous | 0.472 | ambiguous | 0.145 | Stabilizing | 0.993 | D | 0.563 | neutral | None | None | None | None | I |
K/L | 0.399 | ambiguous | 0.4243 | ambiguous | 0.145 | Stabilizing | 0.986 | D | 0.419 | neutral | None | None | None | None | I |
K/M | 0.2932 | likely_benign | 0.3044 | benign | -0.23 | Destabilizing | 0.998 | D | 0.446 | neutral | N | 0.463605379 | None | None | I |
K/N | 0.2544 | likely_benign | 0.2648 | benign | -0.089 | Destabilizing | 0.1 | N | 0.321 | neutral | N | 0.47184993 | None | None | I |
K/P | 0.3543 | ambiguous | 0.3533 | ambiguous | 0.105 | Stabilizing | 0.993 | D | 0.449 | neutral | None | None | None | None | I |
K/Q | 0.1361 | likely_benign | 0.1389 | benign | -0.225 | Destabilizing | 0.322 | N | 0.309 | neutral | N | 0.493745355 | None | None | I |
K/R | 0.1034 | likely_benign | 0.1026 | benign | -0.17 | Destabilizing | 0.885 | D | 0.441 | neutral | N | 0.438084073 | None | None | I |
K/S | 0.2973 | likely_benign | 0.3029 | benign | -0.418 | Destabilizing | 0.91 | D | 0.437 | neutral | None | None | None | None | I |
K/T | 0.1765 | likely_benign | 0.1842 | benign | -0.335 | Destabilizing | 0.939 | D | 0.425 | neutral | N | 0.471119211 | None | None | I |
K/V | 0.4031 | ambiguous | 0.4142 | ambiguous | 0.105 | Stabilizing | 0.993 | D | 0.467 | neutral | None | None | None | None | I |
K/W | 0.8068 | likely_pathogenic | 0.8061 | pathogenic | -0.542 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | I |
K/Y | 0.65 | likely_pathogenic | 0.6683 | pathogenic | -0.2 | Destabilizing | 0.998 | D | 0.503 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.