Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20525 | 61798;61799;61800 | chr2:178590152;178590151;178590150 | chr2:179454879;179454878;179454877 |
N2AB | 18884 | 56875;56876;56877 | chr2:178590152;178590151;178590150 | chr2:179454879;179454878;179454877 |
N2A | 17957 | 54094;54095;54096 | chr2:178590152;178590151;178590150 | chr2:179454879;179454878;179454877 |
N2B | 11460 | 34603;34604;34605 | chr2:178590152;178590151;178590150 | chr2:179454879;179454878;179454877 |
Novex-1 | 11585 | 34978;34979;34980 | chr2:178590152;178590151;178590150 | chr2:179454879;179454878;179454877 |
Novex-2 | 11652 | 35179;35180;35181 | chr2:178590152;178590151;178590150 | chr2:179454879;179454878;179454877 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.497 | N | 0.437 | 0.203 | 0.185906805712 | gnomAD-4.0.0 | 1.59262E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86044E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3429 | ambiguous | 0.3665 | ambiguous | -2.286 | Highly Destabilizing | 0.272 | N | 0.401 | neutral | None | None | None | None | I |
L/C | 0.4427 | ambiguous | 0.4333 | ambiguous | -1.327 | Destabilizing | 0.968 | D | 0.538 | neutral | None | None | None | None | I |
L/D | 0.7589 | likely_pathogenic | 0.8087 | pathogenic | -2.19 | Highly Destabilizing | 0.726 | D | 0.707 | prob.neutral | None | None | None | None | I |
L/E | 0.5044 | ambiguous | 0.5595 | ambiguous | -2.086 | Highly Destabilizing | 0.726 | D | 0.701 | prob.neutral | None | None | None | None | I |
L/F | 0.1507 | likely_benign | 0.1404 | benign | -1.436 | Destabilizing | 0.497 | N | 0.437 | neutral | N | 0.485479028 | None | None | I |
L/G | 0.591 | likely_pathogenic | 0.6814 | pathogenic | -2.723 | Highly Destabilizing | 0.726 | D | 0.695 | prob.neutral | None | None | None | None | I |
L/H | 0.3433 | ambiguous | 0.3566 | ambiguous | -2.064 | Highly Destabilizing | 0.958 | D | 0.719 | prob.delet. | N | 0.495015308 | None | None | I |
L/I | 0.0767 | likely_benign | 0.0682 | benign | -1.078 | Destabilizing | None | N | 0.155 | neutral | N | 0.393278156 | None | None | I |
L/K | 0.3666 | ambiguous | 0.4288 | ambiguous | -1.79 | Destabilizing | 0.726 | D | 0.649 | neutral | None | None | None | None | I |
L/M | 0.103 | likely_benign | 0.0871 | benign | -0.789 | Destabilizing | 0.567 | D | 0.495 | neutral | None | None | None | None | I |
L/N | 0.4068 | ambiguous | 0.4912 | ambiguous | -1.729 | Destabilizing | 0.89 | D | 0.715 | prob.delet. | None | None | None | None | I |
L/P | 0.6119 | likely_pathogenic | 0.7416 | pathogenic | -1.456 | Destabilizing | 0.859 | D | 0.715 | prob.delet. | N | 0.486621517 | None | None | I |
L/Q | 0.2917 | likely_benign | 0.3096 | benign | -1.787 | Destabilizing | 0.89 | D | 0.662 | neutral | None | None | None | None | I |
L/R | 0.3282 | likely_benign | 0.3859 | ambiguous | -1.265 | Destabilizing | 0.667 | D | 0.656 | neutral | D | 0.527096364 | None | None | I |
L/S | 0.413 | ambiguous | 0.4708 | ambiguous | -2.364 | Highly Destabilizing | 0.726 | D | 0.6 | neutral | None | None | None | None | I |
L/T | 0.2477 | likely_benign | 0.276 | benign | -2.14 | Highly Destabilizing | 0.567 | D | 0.469 | neutral | None | None | None | None | I |
L/V | 0.1074 | likely_benign | 0.0874 | benign | -1.456 | Destabilizing | 0.02 | N | 0.349 | neutral | N | 0.447128497 | None | None | I |
L/W | 0.3568 | ambiguous | 0.3378 | benign | -1.697 | Destabilizing | 0.968 | D | 0.685 | prob.neutral | None | None | None | None | I |
L/Y | 0.3898 | ambiguous | 0.365 | ambiguous | -1.467 | Destabilizing | 0.726 | D | 0.528 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.