Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2052561798;61799;61800 chr2:178590152;178590151;178590150chr2:179454879;179454878;179454877
N2AB1888456875;56876;56877 chr2:178590152;178590151;178590150chr2:179454879;179454878;179454877
N2A1795754094;54095;54096 chr2:178590152;178590151;178590150chr2:179454879;179454878;179454877
N2B1146034603;34604;34605 chr2:178590152;178590151;178590150chr2:179454879;179454878;179454877
Novex-11158534978;34979;34980 chr2:178590152;178590151;178590150chr2:179454879;179454878;179454877
Novex-21165235179;35180;35181 chr2:178590152;178590151;178590150chr2:179454879;179454878;179454877
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-121
  • Domain position: 47
  • Structural Position: 123
  • Q(SASA): 0.3032
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F None None 0.497 N 0.437 0.203 0.185906805712 gnomAD-4.0.0 1.59262E-06 None None None None I None 0 0 None 0 0 None 0 0 2.86044E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.3429 ambiguous 0.3665 ambiguous -2.286 Highly Destabilizing 0.272 N 0.401 neutral None None None None I
L/C 0.4427 ambiguous 0.4333 ambiguous -1.327 Destabilizing 0.968 D 0.538 neutral None None None None I
L/D 0.7589 likely_pathogenic 0.8087 pathogenic -2.19 Highly Destabilizing 0.726 D 0.707 prob.neutral None None None None I
L/E 0.5044 ambiguous 0.5595 ambiguous -2.086 Highly Destabilizing 0.726 D 0.701 prob.neutral None None None None I
L/F 0.1507 likely_benign 0.1404 benign -1.436 Destabilizing 0.497 N 0.437 neutral N 0.485479028 None None I
L/G 0.591 likely_pathogenic 0.6814 pathogenic -2.723 Highly Destabilizing 0.726 D 0.695 prob.neutral None None None None I
L/H 0.3433 ambiguous 0.3566 ambiguous -2.064 Highly Destabilizing 0.958 D 0.719 prob.delet. N 0.495015308 None None I
L/I 0.0767 likely_benign 0.0682 benign -1.078 Destabilizing None N 0.155 neutral N 0.393278156 None None I
L/K 0.3666 ambiguous 0.4288 ambiguous -1.79 Destabilizing 0.726 D 0.649 neutral None None None None I
L/M 0.103 likely_benign 0.0871 benign -0.789 Destabilizing 0.567 D 0.495 neutral None None None None I
L/N 0.4068 ambiguous 0.4912 ambiguous -1.729 Destabilizing 0.89 D 0.715 prob.delet. None None None None I
L/P 0.6119 likely_pathogenic 0.7416 pathogenic -1.456 Destabilizing 0.859 D 0.715 prob.delet. N 0.486621517 None None I
L/Q 0.2917 likely_benign 0.3096 benign -1.787 Destabilizing 0.89 D 0.662 neutral None None None None I
L/R 0.3282 likely_benign 0.3859 ambiguous -1.265 Destabilizing 0.667 D 0.656 neutral D 0.527096364 None None I
L/S 0.413 ambiguous 0.4708 ambiguous -2.364 Highly Destabilizing 0.726 D 0.6 neutral None None None None I
L/T 0.2477 likely_benign 0.276 benign -2.14 Highly Destabilizing 0.567 D 0.469 neutral None None None None I
L/V 0.1074 likely_benign 0.0874 benign -1.456 Destabilizing 0.02 N 0.349 neutral N 0.447128497 None None I
L/W 0.3568 ambiguous 0.3378 benign -1.697 Destabilizing 0.968 D 0.685 prob.neutral None None None None I
L/Y 0.3898 ambiguous 0.365 ambiguous -1.467 Destabilizing 0.726 D 0.528 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.