Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20527 | 61804;61805;61806 | chr2:178590146;178590145;178590144 | chr2:179454873;179454872;179454871 |
N2AB | 18886 | 56881;56882;56883 | chr2:178590146;178590145;178590144 | chr2:179454873;179454872;179454871 |
N2A | 17959 | 54100;54101;54102 | chr2:178590146;178590145;178590144 | chr2:179454873;179454872;179454871 |
N2B | 11462 | 34609;34610;34611 | chr2:178590146;178590145;178590144 | chr2:179454873;179454872;179454871 |
Novex-1 | 11587 | 34984;34985;34986 | chr2:178590146;178590145;178590144 | chr2:179454873;179454872;179454871 |
Novex-2 | 11654 | 35185;35186;35187 | chr2:178590146;178590145;178590144 | chr2:179454873;179454872;179454871 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs2049896999 | None | None | N | 0.239 | 0.141 | 0.248417906384 | gnomAD-4.0.0 | 1.59256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77809E-05 | None | 0 | 0 | 0 | 0 | 0 |
Q/R | None | None | None | N | 0.242 | 0.121 | 0.180583059064 | gnomAD-4.0.0 | 3.18499E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86812E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1508 | likely_benign | 0.1453 | benign | -0.239 | Destabilizing | 0.016 | N | 0.429 | neutral | None | None | None | None | N |
Q/C | 0.3335 | likely_benign | 0.3421 | ambiguous | 0.081 | Stabilizing | 0.864 | D | 0.547 | neutral | None | None | None | None | N |
Q/D | 0.2281 | likely_benign | 0.2354 | benign | 0.094 | Stabilizing | 0.016 | N | 0.351 | neutral | None | None | None | None | N |
Q/E | 0.0734 | likely_benign | 0.083 | benign | 0.137 | Stabilizing | 0.005 | N | 0.275 | neutral | N | 0.44336026 | None | None | N |
Q/F | 0.4835 | ambiguous | 0.4508 | ambiguous | -0.193 | Destabilizing | 0.214 | N | 0.581 | neutral | None | None | None | None | N |
Q/G | 0.1769 | likely_benign | 0.1893 | benign | -0.508 | Destabilizing | 0.031 | N | 0.545 | neutral | None | None | None | None | N |
Q/H | 0.1023 | likely_benign | 0.0981 | benign | -0.271 | Destabilizing | None | N | 0.233 | neutral | N | 0.46700791 | None | None | N |
Q/I | 0.3049 | likely_benign | 0.2959 | benign | 0.406 | Stabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | N |
Q/K | 0.0852 | likely_benign | 0.0846 | benign | -0.001 | Destabilizing | None | N | 0.239 | neutral | N | 0.471642939 | None | None | N |
Q/L | 0.1137 | likely_benign | 0.1127 | benign | 0.406 | Stabilizing | 0.024 | N | 0.559 | neutral | N | 0.48426552 | None | None | N |
Q/M | 0.3125 | likely_benign | 0.2739 | benign | 0.438 | Stabilizing | 0.628 | D | 0.46 | neutral | None | None | None | None | N |
Q/N | 0.1596 | likely_benign | 0.1455 | benign | -0.438 | Destabilizing | None | N | 0.229 | neutral | None | None | None | None | N |
Q/P | 0.1123 | likely_benign | 0.1084 | benign | 0.222 | Stabilizing | 0.106 | N | 0.537 | neutral | N | 0.449768944 | None | None | N |
Q/R | 0.0798 | likely_benign | 0.0892 | benign | 0.082 | Stabilizing | None | N | 0.242 | neutral | N | 0.463620889 | None | None | N |
Q/S | 0.1462 | likely_benign | 0.1259 | benign | -0.471 | Destabilizing | 0.001 | N | 0.233 | neutral | None | None | None | None | N |
Q/T | 0.1267 | likely_benign | 0.1137 | benign | -0.248 | Destabilizing | 0.016 | N | 0.486 | neutral | None | None | None | None | N |
Q/V | 0.1883 | likely_benign | 0.1847 | benign | 0.222 | Stabilizing | 0.072 | N | 0.564 | neutral | None | None | None | None | N |
Q/W | 0.317 | likely_benign | 0.3699 | ambiguous | -0.166 | Destabilizing | 0.864 | D | 0.548 | neutral | None | None | None | None | N |
Q/Y | 0.2465 | likely_benign | 0.2495 | benign | 0.093 | Stabilizing | 0.038 | N | 0.528 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.