Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20528 | 61807;61808;61809 | chr2:178590143;178590142;178590141 | chr2:179454870;179454869;179454868 |
N2AB | 18887 | 56884;56885;56886 | chr2:178590143;178590142;178590141 | chr2:179454870;179454869;179454868 |
N2A | 17960 | 54103;54104;54105 | chr2:178590143;178590142;178590141 | chr2:179454870;179454869;179454868 |
N2B | 11463 | 34612;34613;34614 | chr2:178590143;178590142;178590141 | chr2:179454870;179454869;179454868 |
Novex-1 | 11588 | 34987;34988;34989 | chr2:178590143;178590142;178590141 | chr2:179454870;179454869;179454868 |
Novex-2 | 11655 | 35188;35189;35190 | chr2:178590143;178590142;178590141 | chr2:179454870;179454869;179454868 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs374601610 | -0.161 | None | N | 0.177 | 0.116 | 0.0884992946249 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
D/E | rs374601610 | -0.161 | None | N | 0.177 | 0.116 | 0.0884992946249 | gnomAD-4.0.0 | 6.84431E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99672E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1619 | likely_benign | 0.1907 | benign | -0.114 | Destabilizing | 0.062 | N | 0.325 | neutral | N | 0.473741882 | None | None | N |
D/C | 0.5086 | ambiguous | 0.598 | pathogenic | -0.161 | Destabilizing | 0.935 | D | 0.455 | neutral | None | None | None | None | N |
D/E | 0.1189 | likely_benign | 0.1274 | benign | -0.241 | Destabilizing | None | N | 0.177 | neutral | N | 0.44840072 | None | None | N |
D/F | 0.4823 | ambiguous | 0.5697 | pathogenic | -0.003 | Destabilizing | 0.791 | D | 0.404 | neutral | None | None | None | None | N |
D/G | 0.158 | likely_benign | 0.2035 | benign | -0.303 | Destabilizing | 0.117 | N | 0.264 | neutral | N | 0.449019582 | None | None | N |
D/H | 0.2329 | likely_benign | 0.2803 | benign | 0.335 | Stabilizing | 0.484 | N | 0.275 | neutral | N | 0.485556386 | None | None | N |
D/I | 0.2692 | likely_benign | 0.3229 | benign | 0.333 | Stabilizing | 0.555 | D | 0.403 | neutral | None | None | None | None | N |
D/K | 0.3076 | likely_benign | 0.378 | ambiguous | 0.24 | Stabilizing | 0.081 | N | 0.253 | neutral | None | None | None | None | N |
D/L | 0.3102 | likely_benign | 0.3772 | ambiguous | 0.333 | Stabilizing | 0.38 | N | 0.391 | neutral | None | None | None | None | N |
D/M | 0.5082 | ambiguous | 0.5673 | pathogenic | 0.215 | Stabilizing | 0.935 | D | 0.417 | neutral | None | None | None | None | N |
D/N | 0.1022 | likely_benign | 0.113 | benign | -0.07 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.415309654 | None | None | N |
D/P | 0.6406 | likely_pathogenic | 0.6927 | pathogenic | 0.206 | Stabilizing | 0.555 | D | 0.285 | neutral | None | None | None | None | N |
D/Q | 0.2614 | likely_benign | 0.3053 | benign | -0.019 | Destabilizing | 0.235 | N | 0.256 | neutral | None | None | None | None | N |
D/R | 0.3508 | ambiguous | 0.4469 | ambiguous | 0.506 | Stabilizing | 0.235 | N | 0.357 | neutral | None | None | None | None | N |
D/S | 0.1276 | likely_benign | 0.1475 | benign | -0.18 | Destabilizing | 0.035 | N | 0.275 | neutral | None | None | None | None | N |
D/T | 0.2057 | likely_benign | 0.2303 | benign | -0.031 | Destabilizing | 0.149 | N | 0.248 | neutral | None | None | None | None | N |
D/V | 0.156 | likely_benign | 0.19 | benign | 0.206 | Stabilizing | 0.317 | N | 0.391 | neutral | N | 0.488999336 | None | None | N |
D/W | 0.7966 | likely_pathogenic | 0.8548 | pathogenic | 0.099 | Stabilizing | 0.935 | D | 0.534 | neutral | None | None | None | None | N |
D/Y | 0.1877 | likely_benign | 0.246 | benign | 0.223 | Stabilizing | 0.741 | D | 0.406 | neutral | N | 0.518052806 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.