Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20540 | 61843;61844;61845 | chr2:178590107;178590106;178590105 | chr2:179454834;179454833;179454832 |
N2AB | 18899 | 56920;56921;56922 | chr2:178590107;178590106;178590105 | chr2:179454834;179454833;179454832 |
N2A | 17972 | 54139;54140;54141 | chr2:178590107;178590106;178590105 | chr2:179454834;179454833;179454832 |
N2B | 11475 | 34648;34649;34650 | chr2:178590107;178590106;178590105 | chr2:179454834;179454833;179454832 |
Novex-1 | 11600 | 35023;35024;35025 | chr2:178590107;178590106;178590105 | chr2:179454834;179454833;179454832 |
Novex-2 | 11667 | 35224;35225;35226 | chr2:178590107;178590106;178590105 | chr2:179454834;179454833;179454832 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.324 | N | 0.439 | 0.198 | 0.667260656149 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
V/I | None | None | 0.001 | N | 0.213 | 0.064 | 0.301122078929 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1615 | likely_benign | 0.1349 | benign | -1.055 | Destabilizing | 0.165 | N | 0.331 | neutral | N | 0.468159917 | None | None | I |
V/C | 0.614 | likely_pathogenic | 0.5569 | ambiguous | -0.801 | Destabilizing | 0.981 | D | 0.359 | neutral | None | None | None | None | I |
V/D | 0.2912 | likely_benign | 0.2697 | benign | -0.776 | Destabilizing | 0.627 | D | 0.445 | neutral | N | 0.441666749 | None | None | I |
V/E | 0.2031 | likely_benign | 0.2029 | benign | -0.856 | Destabilizing | 0.241 | N | 0.424 | neutral | None | None | None | None | I |
V/F | 0.1793 | likely_benign | 0.1644 | benign | -1.044 | Destabilizing | 0.627 | D | 0.389 | neutral | N | 0.457078918 | None | None | I |
V/G | 0.1837 | likely_benign | 0.1619 | benign | -1.268 | Destabilizing | 0.324 | N | 0.439 | neutral | N | 0.469026708 | None | None | I |
V/H | 0.4488 | ambiguous | 0.4151 | ambiguous | -0.75 | Destabilizing | 0.981 | D | 0.429 | neutral | None | None | None | None | I |
V/I | 0.0824 | likely_benign | 0.0734 | benign | -0.613 | Destabilizing | 0.001 | N | 0.213 | neutral | N | 0.480859855 | None | None | I |
V/K | 0.193 | likely_benign | 0.2106 | benign | -0.896 | Destabilizing | 0.002 | N | 0.262 | neutral | None | None | None | None | I |
V/L | 0.1294 | likely_benign | 0.1119 | benign | -0.613 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.468026631 | None | None | I |
V/M | 0.1136 | likely_benign | 0.0998 | benign | -0.436 | Destabilizing | 0.69 | D | 0.361 | neutral | None | None | None | None | I |
V/N | 0.1518 | likely_benign | 0.1477 | benign | -0.63 | Destabilizing | 0.69 | D | 0.44 | neutral | None | None | None | None | I |
V/P | 0.8576 | likely_pathogenic | 0.8353 | pathogenic | -0.724 | Destabilizing | 0.818 | D | 0.433 | neutral | None | None | None | None | I |
V/Q | 0.1916 | likely_benign | 0.1837 | benign | -0.889 | Destabilizing | 0.69 | D | 0.425 | neutral | None | None | None | None | I |
V/R | 0.2188 | likely_benign | 0.2238 | benign | -0.289 | Destabilizing | 0.527 | D | 0.446 | neutral | None | None | None | None | I |
V/S | 0.1364 | likely_benign | 0.1301 | benign | -1.073 | Destabilizing | 0.241 | N | 0.427 | neutral | None | None | None | None | I |
V/T | 0.1109 | likely_benign | 0.1037 | benign | -1.052 | Destabilizing | 0.004 | N | 0.145 | neutral | None | None | None | None | I |
V/W | 0.8426 | likely_pathogenic | 0.7859 | pathogenic | -1.127 | Destabilizing | 0.981 | D | 0.489 | neutral | None | None | None | None | I |
V/Y | 0.5584 | ambiguous | 0.5053 | ambiguous | -0.852 | Destabilizing | 0.818 | D | 0.375 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.