Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20555 | 61888;61889;61890 | chr2:178590062;178590061;178590060 | chr2:179454789;179454788;179454787 |
N2AB | 18914 | 56965;56966;56967 | chr2:178590062;178590061;178590060 | chr2:179454789;179454788;179454787 |
N2A | 17987 | 54184;54185;54186 | chr2:178590062;178590061;178590060 | chr2:179454789;179454788;179454787 |
N2B | 11490 | 34693;34694;34695 | chr2:178590062;178590061;178590060 | chr2:179454789;179454788;179454787 |
Novex-1 | 11615 | 35068;35069;35070 | chr2:178590062;178590061;178590060 | chr2:179454789;179454788;179454787 |
Novex-2 | 11682 | 35269;35270;35271 | chr2:178590062;178590061;178590060 | chr2:179454789;179454788;179454787 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1559577387 | None | 0.492 | N | 0.429 | 0.235 | 0.259761712551 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0707 | likely_benign | 0.0789 | benign | -0.29 | Destabilizing | 0.004 | N | 0.223 | neutral | None | None | None | None | I |
S/C | 0.0657 | likely_benign | 0.0693 | benign | -0.418 | Destabilizing | 0.001 | N | 0.313 | neutral | N | 0.479187774 | None | None | I |
S/D | 0.7902 | likely_pathogenic | 0.8924 | pathogenic | -0.174 | Destabilizing | 0.563 | D | 0.391 | neutral | None | None | None | None | I |
S/E | 0.8358 | likely_pathogenic | 0.9049 | pathogenic | -0.283 | Destabilizing | 0.563 | D | 0.415 | neutral | None | None | None | None | I |
S/F | 0.324 | likely_benign | 0.4723 | ambiguous | -1.058 | Destabilizing | 0.818 | D | 0.601 | neutral | None | None | None | None | I |
S/G | 0.1102 | likely_benign | 0.1408 | benign | -0.288 | Destabilizing | None | N | 0.226 | neutral | N | 0.459484505 | None | None | I |
S/H | 0.6114 | likely_pathogenic | 0.7133 | pathogenic | -0.613 | Destabilizing | 0.981 | D | 0.542 | neutral | None | None | None | None | I |
S/I | 0.2668 | likely_benign | 0.3666 | ambiguous | -0.411 | Destabilizing | 0.627 | D | 0.581 | neutral | N | 0.464698324 | None | None | I |
S/K | 0.9165 | likely_pathogenic | 0.9593 | pathogenic | -0.409 | Destabilizing | 0.388 | N | 0.389 | neutral | None | None | None | None | I |
S/L | 0.1458 | likely_benign | 0.2161 | benign | -0.411 | Destabilizing | 0.241 | N | 0.562 | neutral | None | None | None | None | I |
S/M | 0.2922 | likely_benign | 0.3628 | ambiguous | -0.266 | Destabilizing | 0.932 | D | 0.539 | neutral | None | None | None | None | I |
S/N | 0.3394 | likely_benign | 0.4663 | ambiguous | -0.195 | Destabilizing | 0.492 | N | 0.429 | neutral | N | 0.501909918 | None | None | I |
S/P | 0.8296 | likely_pathogenic | 0.9256 | pathogenic | -0.353 | Destabilizing | 0.818 | D | 0.509 | neutral | None | None | None | None | I |
S/Q | 0.7567 | likely_pathogenic | 0.8308 | pathogenic | -0.406 | Destabilizing | 0.932 | D | 0.423 | neutral | None | None | None | None | I |
S/R | 0.8238 | likely_pathogenic | 0.9059 | pathogenic | -0.218 | Destabilizing | 0.773 | D | 0.513 | neutral | N | 0.487999258 | None | None | I |
S/T | 0.1208 | likely_benign | 0.1565 | benign | -0.316 | Destabilizing | 0.324 | N | 0.397 | neutral | N | 0.503061924 | None | None | I |
S/V | 0.2174 | likely_benign | 0.2822 | benign | -0.353 | Destabilizing | 0.241 | N | 0.559 | neutral | None | None | None | None | I |
S/W | 0.6112 | likely_pathogenic | 0.7326 | pathogenic | -1.144 | Destabilizing | 0.981 | D | 0.599 | neutral | None | None | None | None | I |
S/Y | 0.364 | ambiguous | 0.5025 | ambiguous | -0.849 | Destabilizing | 0.932 | D | 0.599 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.