Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20558 | 61897;61898;61899 | chr2:178590053;178590052;178590051 | chr2:179454780;179454779;179454778 |
N2AB | 18917 | 56974;56975;56976 | chr2:178590053;178590052;178590051 | chr2:179454780;179454779;179454778 |
N2A | 17990 | 54193;54194;54195 | chr2:178590053;178590052;178590051 | chr2:179454780;179454779;179454778 |
N2B | 11493 | 34702;34703;34704 | chr2:178590053;178590052;178590051 | chr2:179454780;179454779;179454778 |
Novex-1 | 11618 | 35077;35078;35079 | chr2:178590053;178590052;178590051 | chr2:179454780;179454779;179454778 |
Novex-2 | 11685 | 35278;35279;35280 | chr2:178590053;178590052;178590051 | chr2:179454780;179454779;179454778 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 1.0 | N | 0.681 | 0.412 | 0.461759001683 | gnomAD-4.0.0 | 1.59271E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43361E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.432 | ambiguous | 0.4449 | ambiguous | -0.724 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/D | 0.7394 | likely_pathogenic | 0.8045 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.502544636 | None | None | N |
A/E | 0.6615 | likely_pathogenic | 0.7427 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/F | 0.4812 | ambiguous | 0.5389 | ambiguous | -0.955 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
A/G | 0.1979 | likely_benign | 0.2243 | benign | -0.329 | Destabilizing | 1.0 | D | 0.576 | neutral | N | 0.52134877 | None | None | N |
A/H | 0.6716 | likely_pathogenic | 0.7208 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
A/I | 0.4114 | ambiguous | 0.4638 | ambiguous | -0.377 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
A/K | 0.6475 | likely_pathogenic | 0.7179 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
A/L | 0.362 | ambiguous | 0.4114 | ambiguous | -0.377 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
A/M | 0.3778 | ambiguous | 0.4145 | ambiguous | -0.384 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/N | 0.5933 | likely_pathogenic | 0.6555 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
A/P | 0.9787 | likely_pathogenic | 0.9888 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.51485431 | None | None | N |
A/Q | 0.5043 | ambiguous | 0.557 | ambiguous | -0.671 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
A/R | 0.5466 | ambiguous | 0.6251 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/S | 0.1205 | likely_benign | 0.1327 | benign | -0.491 | Destabilizing | 1.0 | D | 0.591 | neutral | D | 0.526325573 | None | None | N |
A/T | 0.1297 | likely_benign | 0.1419 | benign | -0.584 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.519746317 | None | None | N |
A/V | 0.1985 | likely_benign | 0.2255 | benign | -0.315 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.497098744 | None | None | N |
A/W | 0.9087 | likely_pathogenic | 0.9295 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
A/Y | 0.6921 | likely_pathogenic | 0.741 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.