Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20565 | 61918;61919;61920 | chr2:178590032;178590031;178590030 | chr2:179454759;179454758;179454757 |
N2AB | 18924 | 56995;56996;56997 | chr2:178590032;178590031;178590030 | chr2:179454759;179454758;179454757 |
N2A | 17997 | 54214;54215;54216 | chr2:178590032;178590031;178590030 | chr2:179454759;179454758;179454757 |
N2B | 11500 | 34723;34724;34725 | chr2:178590032;178590031;178590030 | chr2:179454759;179454758;179454757 |
Novex-1 | 11625 | 35098;35099;35100 | chr2:178590032;178590031;178590030 | chr2:179454759;179454758;179454757 |
Novex-2 | 11692 | 35299;35300;35301 | chr2:178590032;178590031;178590030 | chr2:179454759;179454758;179454757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 1.0 | N | 0.741 | 0.343 | 0.24896430686 | gnomAD-4.0.0 | 6.84484E-07 | None | None | None | None | I | None | 2.99061E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.578 | likely_pathogenic | 0.5989 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/C | 0.497 | ambiguous | 0.5316 | ambiguous | -0.094 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
N/D | 0.4656 | ambiguous | 0.4681 | ambiguous | -0.569 | Destabilizing | 0.999 | D | 0.605 | neutral | N | 0.498002821 | None | None | I |
N/E | 0.7532 | likely_pathogenic | 0.7461 | pathogenic | -0.463 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/F | 0.8204 | likely_pathogenic | 0.8259 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
N/G | 0.7349 | likely_pathogenic | 0.7654 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | I |
N/H | 0.162 | likely_benign | 0.1716 | benign | -0.89 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.500773767 | None | None | I |
N/I | 0.4792 | ambiguous | 0.4939 | ambiguous | 0.002 | Stabilizing | 1.0 | D | 0.799 | deleterious | N | 0.489113979 | None | None | I |
N/K | 0.7033 | likely_pathogenic | 0.7096 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.457769565 | None | None | I |
N/L | 0.4655 | ambiguous | 0.4671 | ambiguous | 0.002 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
N/M | 0.5669 | likely_pathogenic | 0.5774 | pathogenic | 0.367 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
N/P | 0.9852 | likely_pathogenic | 0.9868 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
N/Q | 0.6103 | likely_pathogenic | 0.6201 | pathogenic | -0.927 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
N/R | 0.6792 | likely_pathogenic | 0.6886 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
N/S | 0.1564 | likely_benign | 0.1677 | benign | -1.0 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.481243857 | None | None | I |
N/T | 0.2171 | likely_benign | 0.2241 | benign | -0.704 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | N | 0.452113029 | None | None | I |
N/V | 0.457 | ambiguous | 0.4778 | ambiguous | -0.267 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
N/W | 0.9235 | likely_pathogenic | 0.9302 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
N/Y | 0.3554 | ambiguous | 0.358 | ambiguous | -0.076 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.518628809 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.