Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20574 | 61945;61946;61947 | chr2:178590005;178590004;178590003 | chr2:179454732;179454731;179454730 |
N2AB | 18933 | 57022;57023;57024 | chr2:178590005;178590004;178590003 | chr2:179454732;179454731;179454730 |
N2A | 18006 | 54241;54242;54243 | chr2:178590005;178590004;178590003 | chr2:179454732;179454731;179454730 |
N2B | 11509 | 34750;34751;34752 | chr2:178590005;178590004;178590003 | chr2:179454732;179454731;179454730 |
Novex-1 | 11634 | 35125;35126;35127 | chr2:178590005;178590004;178590003 | chr2:179454732;179454731;179454730 |
Novex-2 | 11701 | 35326;35327;35328 | chr2:178590005;178590004;178590003 | chr2:179454732;179454731;179454730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1176666570 | -0.435 | 0.99 | N | 0.589 | 0.327 | 0.227934060464 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3558 | ambiguous | 0.3825 | ambiguous | -0.623 | Destabilizing | 0.993 | D | 0.625 | neutral | None | None | None | None | N |
Q/C | 0.6658 | likely_pathogenic | 0.6869 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Q/D | 0.7534 | likely_pathogenic | 0.7611 | pathogenic | -0.692 | Destabilizing | 0.971 | D | 0.573 | neutral | None | None | None | None | N |
Q/E | 0.1333 | likely_benign | 0.1342 | benign | -0.585 | Destabilizing | 0.953 | D | 0.468 | neutral | N | 0.451043088 | None | None | N |
Q/F | 0.8226 | likely_pathogenic | 0.8284 | pathogenic | -0.183 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
Q/G | 0.413 | ambiguous | 0.4263 | ambiguous | -1.002 | Destabilizing | 0.985 | D | 0.691 | prob.neutral | None | None | None | None | N |
Q/H | 0.4035 | ambiguous | 0.4146 | ambiguous | -0.899 | Destabilizing | 0.997 | D | 0.579 | neutral | N | 0.518750948 | None | None | N |
Q/I | 0.4519 | ambiguous | 0.4452 | ambiguous | 0.355 | Stabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
Q/K | 0.1242 | likely_benign | 0.1239 | benign | -0.603 | Destabilizing | 0.98 | D | 0.557 | neutral | N | 0.494276578 | None | None | N |
Q/L | 0.186 | likely_benign | 0.1912 | benign | 0.355 | Stabilizing | 0.99 | D | 0.665 | neutral | D | 0.524599484 | None | None | N |
Q/M | 0.4394 | ambiguous | 0.4437 | ambiguous | 0.785 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
Q/N | 0.4934 | ambiguous | 0.4905 | ambiguous | -1.036 | Destabilizing | 0.469 | N | 0.326 | neutral | None | None | None | None | N |
Q/P | 0.65 | likely_pathogenic | 0.73 | pathogenic | 0.06 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | D | 0.524946201 | None | None | N |
Q/R | 0.1239 | likely_benign | 0.1272 | benign | -0.584 | Destabilizing | 0.99 | D | 0.589 | neutral | N | 0.446367987 | None | None | N |
Q/S | 0.4268 | ambiguous | 0.4279 | ambiguous | -1.107 | Destabilizing | 0.985 | D | 0.555 | neutral | None | None | None | None | N |
Q/T | 0.2966 | likely_benign | 0.3122 | benign | -0.815 | Destabilizing | 0.985 | D | 0.643 | neutral | None | None | None | None | N |
Q/V | 0.29 | likely_benign | 0.3001 | benign | 0.06 | Stabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
Q/W | 0.7914 | likely_pathogenic | 0.8011 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Q/Y | 0.6625 | likely_pathogenic | 0.6718 | pathogenic | 0.07 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.