Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20578 | 61957;61958;61959 | chr2:178589993;178589992;178589991 | chr2:179454720;179454719;179454718 |
N2AB | 18937 | 57034;57035;57036 | chr2:178589993;178589992;178589991 | chr2:179454720;179454719;179454718 |
N2A | 18010 | 54253;54254;54255 | chr2:178589993;178589992;178589991 | chr2:179454720;179454719;179454718 |
N2B | 11513 | 34762;34763;34764 | chr2:178589993;178589992;178589991 | chr2:179454720;179454719;179454718 |
Novex-1 | 11638 | 35137;35138;35139 | chr2:178589993;178589992;178589991 | chr2:179454720;179454719;179454718 |
Novex-2 | 11705 | 35338;35339;35340 | chr2:178589993;178589992;178589991 | chr2:179454720;179454719;179454718 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.015 | D | 0.36 | 0.121 | 0.263140351381 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5294 | ambiguous | 0.5783 | pathogenic | -1.512 | Destabilizing | 0.165 | N | 0.42 | neutral | N | 0.507533876 | None | None | N |
V/C | 0.8835 | likely_pathogenic | 0.8822 | pathogenic | -1.223 | Destabilizing | 0.932 | D | 0.651 | neutral | None | None | None | None | N |
V/D | 0.9789 | likely_pathogenic | 0.9756 | pathogenic | -0.861 | Destabilizing | 0.773 | D | 0.709 | prob.delet. | D | 0.528602201 | None | None | N |
V/E | 0.9562 | likely_pathogenic | 0.9504 | pathogenic | -0.765 | Destabilizing | 0.563 | D | 0.647 | neutral | None | None | None | None | N |
V/F | 0.5919 | likely_pathogenic | 0.6451 | pathogenic | -0.956 | Destabilizing | 0.627 | D | 0.656 | neutral | N | 0.476221084 | None | None | N |
V/G | 0.7743 | likely_pathogenic | 0.7733 | pathogenic | -1.921 | Destabilizing | 0.492 | N | 0.677 | prob.neutral | N | 0.498127682 | None | None | N |
V/H | 0.9848 | likely_pathogenic | 0.9835 | pathogenic | -1.334 | Destabilizing | 0.981 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/I | 0.0905 | likely_benign | 0.0994 | benign | -0.455 | Destabilizing | 0.001 | N | 0.185 | neutral | N | 0.47398145 | None | None | N |
V/K | 0.9753 | likely_pathogenic | 0.9693 | pathogenic | -1.128 | Destabilizing | 0.563 | D | 0.633 | neutral | None | None | None | None | N |
V/L | 0.4998 | ambiguous | 0.5134 | ambiguous | -0.455 | Destabilizing | 0.015 | N | 0.36 | neutral | D | 0.525871708 | None | None | N |
V/M | 0.4411 | ambiguous | 0.4752 | ambiguous | -0.551 | Destabilizing | 0.054 | N | 0.363 | neutral | None | None | None | None | N |
V/N | 0.9296 | likely_pathogenic | 0.9226 | pathogenic | -1.111 | Destabilizing | 0.818 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/P | 0.7937 | likely_pathogenic | 0.8012 | pathogenic | -0.773 | Destabilizing | 0.932 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/Q | 0.9591 | likely_pathogenic | 0.9546 | pathogenic | -1.084 | Destabilizing | 0.818 | D | 0.674 | neutral | None | None | None | None | N |
V/R | 0.968 | likely_pathogenic | 0.9614 | pathogenic | -0.84 | Destabilizing | 0.818 | D | 0.708 | prob.delet. | None | None | None | None | N |
V/S | 0.8328 | likely_pathogenic | 0.8398 | pathogenic | -1.801 | Destabilizing | 0.241 | N | 0.566 | neutral | None | None | None | None | N |
V/T | 0.5952 | likely_pathogenic | 0.624 | pathogenic | -1.553 | Destabilizing | 0.004 | N | 0.171 | neutral | None | None | None | None | N |
V/W | 0.9851 | likely_pathogenic | 0.986 | pathogenic | -1.153 | Destabilizing | 0.981 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/Y | 0.9329 | likely_pathogenic | 0.9398 | pathogenic | -0.835 | Destabilizing | 0.818 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.