Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20584 | 61975;61976;61977 | chr2:178589975;178589974;178589973 | chr2:179454702;179454701;179454700 |
N2AB | 18943 | 57052;57053;57054 | chr2:178589975;178589974;178589973 | chr2:179454702;179454701;179454700 |
N2A | 18016 | 54271;54272;54273 | chr2:178589975;178589974;178589973 | chr2:179454702;179454701;179454700 |
N2B | 11519 | 34780;34781;34782 | chr2:178589975;178589974;178589973 | chr2:179454702;179454701;179454700 |
Novex-1 | 11644 | 35155;35156;35157 | chr2:178589975;178589974;178589973 | chr2:179454702;179454701;179454700 |
Novex-2 | 11711 | 35356;35357;35358 | chr2:178589975;178589974;178589973 | chr2:179454702;179454701;179454700 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.801 | N | 0.425 | 0.269 | 0.297375071883 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4196 | ambiguous | 0.297 | benign | -0.59 | Destabilizing | 0.801 | D | 0.369 | neutral | N | 0.469495563 | None | None | I |
E/C | 0.9575 | likely_pathogenic | 0.9178 | pathogenic | 0.028 | Stabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | I |
E/D | 0.1013 | likely_benign | 0.1024 | benign | -0.599 | Destabilizing | 0.002 | N | 0.089 | neutral | N | 0.34368355 | None | None | I |
E/F | 0.9339 | likely_pathogenic | 0.8638 | pathogenic | -0.638 | Destabilizing | 0.991 | D | 0.441 | neutral | None | None | None | None | I |
E/G | 0.328 | likely_benign | 0.2232 | benign | -0.81 | Destabilizing | 0.801 | D | 0.363 | neutral | N | 0.450563086 | None | None | I |
E/H | 0.7826 | likely_pathogenic | 0.6547 | pathogenic | -0.697 | Destabilizing | 0.974 | D | 0.395 | neutral | None | None | None | None | I |
E/I | 0.7785 | likely_pathogenic | 0.609 | pathogenic | -0.037 | Destabilizing | 0.974 | D | 0.439 | neutral | None | None | None | None | I |
E/K | 0.4935 | ambiguous | 0.3292 | benign | 0.084 | Stabilizing | 0.801 | D | 0.425 | neutral | N | 0.431803967 | None | None | I |
E/L | 0.7805 | likely_pathogenic | 0.6419 | pathogenic | -0.037 | Destabilizing | 0.974 | D | 0.419 | neutral | None | None | None | None | I |
E/M | 0.8048 | likely_pathogenic | 0.6707 | pathogenic | 0.337 | Stabilizing | 0.998 | D | 0.406 | neutral | None | None | None | None | I |
E/N | 0.3372 | likely_benign | 0.2403 | benign | -0.149 | Destabilizing | 0.067 | N | 0.208 | neutral | None | None | None | None | I |
E/P | 0.9687 | likely_pathogenic | 0.9392 | pathogenic | -0.201 | Destabilizing | 0.974 | D | 0.429 | neutral | None | None | None | None | I |
E/Q | 0.3662 | ambiguous | 0.2532 | benign | -0.137 | Destabilizing | 0.891 | D | 0.457 | neutral | N | 0.469495563 | None | None | I |
E/R | 0.6668 | likely_pathogenic | 0.4939 | ambiguous | 0.181 | Stabilizing | 0.974 | D | 0.419 | neutral | None | None | None | None | I |
E/S | 0.407 | ambiguous | 0.2867 | benign | -0.339 | Destabilizing | 0.842 | D | 0.363 | neutral | None | None | None | None | I |
E/T | 0.4466 | ambiguous | 0.3019 | benign | -0.167 | Destabilizing | 0.842 | D | 0.429 | neutral | None | None | None | None | I |
E/V | 0.6027 | likely_pathogenic | 0.4153 | ambiguous | -0.201 | Destabilizing | 0.966 | D | 0.406 | neutral | N | 0.478827122 | None | None | I |
E/W | 0.9706 | likely_pathogenic | 0.9373 | pathogenic | -0.522 | Destabilizing | 0.998 | D | 0.58 | neutral | None | None | None | None | I |
E/Y | 0.8318 | likely_pathogenic | 0.7038 | pathogenic | -0.407 | Destabilizing | 0.991 | D | 0.425 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.