Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20591 | 61996;61997;61998 | chr2:178589954;178589953;178589952 | chr2:179454681;179454680;179454679 |
N2AB | 18950 | 57073;57074;57075 | chr2:178589954;178589953;178589952 | chr2:179454681;179454680;179454679 |
N2A | 18023 | 54292;54293;54294 | chr2:178589954;178589953;178589952 | chr2:179454681;179454680;179454679 |
N2B | 11526 | 34801;34802;34803 | chr2:178589954;178589953;178589952 | chr2:179454681;179454680;179454679 |
Novex-1 | 11651 | 35176;35177;35178 | chr2:178589954;178589953;178589952 | chr2:179454681;179454680;179454679 |
Novex-2 | 11718 | 35377;35378;35379 | chr2:178589954;178589953;178589952 | chr2:179454681;179454680;179454679 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1327237859 | -0.777 | 0.978 | N | 0.492 | 0.382 | 0.330331372229 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1327237859 | -0.777 | 0.978 | N | 0.492 | 0.382 | 0.330331372229 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4208 | ambiguous | 0.4419 | ambiguous | -0.657 | Destabilizing | 0.989 | D | 0.641 | neutral | N | 0.505437721 | None | None | N |
E/C | 0.9471 | likely_pathogenic | 0.9494 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/D | 0.1463 | likely_benign | 0.1619 | benign | -1.028 | Destabilizing | 0.054 | N | 0.167 | neutral | N | 0.452584671 | None | None | N |
E/F | 0.9537 | likely_pathogenic | 0.9529 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/G | 0.3736 | ambiguous | 0.3849 | ambiguous | -0.966 | Destabilizing | 0.978 | D | 0.675 | neutral | N | 0.516636149 | None | None | N |
E/H | 0.8371 | likely_pathogenic | 0.8443 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
E/I | 0.7863 | likely_pathogenic | 0.7949 | pathogenic | 0.162 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
E/K | 0.5433 | ambiguous | 0.5456 | ambiguous | -0.583 | Destabilizing | 0.978 | D | 0.492 | neutral | N | 0.4752481 | None | None | N |
E/L | 0.8012 | likely_pathogenic | 0.8076 | pathogenic | 0.162 | Stabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
E/M | 0.814 | likely_pathogenic | 0.8136 | pathogenic | 0.552 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.4265 | ambiguous | 0.4418 | ambiguous | -0.835 | Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | N |
E/P | 0.9826 | likely_pathogenic | 0.9862 | pathogenic | -0.089 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
E/Q | 0.3466 | ambiguous | 0.3561 | ambiguous | -0.745 | Destabilizing | 0.997 | D | 0.601 | neutral | N | 0.495412728 | None | None | N |
E/R | 0.7103 | likely_pathogenic | 0.7127 | pathogenic | -0.371 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
E/S | 0.4187 | ambiguous | 0.4439 | ambiguous | -1.099 | Destabilizing | 0.983 | D | 0.516 | neutral | None | None | None | None | N |
E/T | 0.5308 | ambiguous | 0.5555 | ambiguous | -0.862 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
E/V | 0.5822 | likely_pathogenic | 0.597 | pathogenic | -0.089 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.468979382 | None | None | N |
E/W | 0.9829 | likely_pathogenic | 0.9811 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/Y | 0.8976 | likely_pathogenic | 0.8971 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.