Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20596 | 62011;62012;62013 | chr2:178589939;178589938;178589937 | chr2:179454666;179454665;179454664 |
N2AB | 18955 | 57088;57089;57090 | chr2:178589939;178589938;178589937 | chr2:179454666;179454665;179454664 |
N2A | 18028 | 54307;54308;54309 | chr2:178589939;178589938;178589937 | chr2:179454666;179454665;179454664 |
N2B | 11531 | 34816;34817;34818 | chr2:178589939;178589938;178589937 | chr2:179454666;179454665;179454664 |
Novex-1 | 11656 | 35191;35192;35193 | chr2:178589939;178589938;178589937 | chr2:179454666;179454665;179454664 |
Novex-2 | 11723 | 35392;35393;35394 | chr2:178589939;178589938;178589937 | chr2:179454666;179454665;179454664 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.999 | N | 0.604 | 0.343 | 0.26547132957 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7408 | likely_pathogenic | 0.7283 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
N/C | 0.658 | likely_pathogenic | 0.6488 | pathogenic | 0.178 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
N/D | 0.1791 | likely_benign | 0.1744 | benign | -0.746 | Destabilizing | 0.999 | D | 0.604 | neutral | N | 0.413292777 | None | None | N |
N/E | 0.8745 | likely_pathogenic | 0.8636 | pathogenic | -0.732 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
N/F | 0.9396 | likely_pathogenic | 0.9393 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
N/G | 0.7698 | likely_pathogenic | 0.7709 | pathogenic | -0.87 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
N/H | 0.4864 | ambiguous | 0.4794 | ambiguous | -0.963 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | N | 0.476457666 | None | None | N |
N/I | 0.8241 | likely_pathogenic | 0.8216 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.493093891 | None | None | N |
N/K | 0.9393 | likely_pathogenic | 0.9338 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.482925673 | None | None | N |
N/L | 0.7723 | likely_pathogenic | 0.7685 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
N/M | 0.8636 | likely_pathogenic | 0.8634 | pathogenic | 0.614 | Stabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
N/P | 0.9257 | likely_pathogenic | 0.9085 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
N/Q | 0.8831 | likely_pathogenic | 0.8784 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
N/R | 0.917 | likely_pathogenic | 0.9143 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
N/S | 0.1904 | likely_benign | 0.1915 | benign | -0.482 | Destabilizing | 0.999 | D | 0.57 | neutral | N | 0.466921332 | None | None | N |
N/T | 0.506 | ambiguous | 0.5014 | ambiguous | -0.309 | Destabilizing | 0.999 | D | 0.674 | neutral | N | 0.513648985 | None | None | N |
N/V | 0.8022 | likely_pathogenic | 0.8044 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
N/W | 0.9806 | likely_pathogenic | 0.98 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
N/Y | 0.6378 | likely_pathogenic | 0.6375 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.511451635 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.