Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20600 | 62023;62024;62025 | chr2:178589927;178589926;178589925 | chr2:179454654;179454653;179454652 |
N2AB | 18959 | 57100;57101;57102 | chr2:178589927;178589926;178589925 | chr2:179454654;179454653;179454652 |
N2A | 18032 | 54319;54320;54321 | chr2:178589927;178589926;178589925 | chr2:179454654;179454653;179454652 |
N2B | 11535 | 34828;34829;34830 | chr2:178589927;178589926;178589925 | chr2:179454654;179454653;179454652 |
Novex-1 | 11660 | 35203;35204;35205 | chr2:178589927;178589926;178589925 | chr2:179454654;179454653;179454652 |
Novex-2 | 11727 | 35404;35405;35406 | chr2:178589927;178589926;178589925 | chr2:179454654;179454653;179454652 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1337048658 | 0.202 | 0.999 | N | 0.469 | 0.144 | 0.311691414656 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1337048658 | 0.202 | 0.999 | N | 0.469 | 0.144 | 0.311691414656 | gnomAD-4.0.0 | 1.59248E-06 | None | None | None | None | I | None | 0 | 2.28885E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4063 | ambiguous | 0.4468 | ambiguous | -0.292 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.507149874 | None | None | I |
E/C | 0.967 | likely_pathogenic | 0.9732 | pathogenic | None | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/D | 0.1582 | likely_benign | 0.1572 | benign | -0.208 | Destabilizing | 0.999 | D | 0.469 | neutral | N | 0.477000326 | None | None | I |
E/F | 0.9557 | likely_pathogenic | 0.9657 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | I |
E/G | 0.5287 | ambiguous | 0.5682 | pathogenic | -0.472 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.482399603 | None | None | I |
E/H | 0.8543 | likely_pathogenic | 0.8815 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
E/I | 0.7642 | likely_pathogenic | 0.7923 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
E/K | 0.5464 | ambiguous | 0.5779 | pathogenic | 0.357 | Stabilizing | 0.999 | D | 0.616 | neutral | N | 0.498549034 | None | None | I |
E/L | 0.7906 | likely_pathogenic | 0.8226 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
E/M | 0.8265 | likely_pathogenic | 0.8554 | pathogenic | 0.197 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
E/N | 0.5466 | ambiguous | 0.5853 | pathogenic | 0.124 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/P | 0.6229 | likely_pathogenic | 0.6381 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
E/Q | 0.3961 | ambiguous | 0.4582 | ambiguous | 0.153 | Stabilizing | 1.0 | D | 0.62 | neutral | D | 0.524831558 | None | None | I |
E/R | 0.6938 | likely_pathogenic | 0.7299 | pathogenic | 0.552 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/S | 0.5048 | ambiguous | 0.5441 | ambiguous | -0.06 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | I |
E/T | 0.5745 | likely_pathogenic | 0.6168 | pathogenic | 0.087 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
E/V | 0.5468 | ambiguous | 0.5899 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.485424569 | None | None | I |
E/W | 0.9885 | likely_pathogenic | 0.9909 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/Y | 0.9201 | likely_pathogenic | 0.9361 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.