Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20605 | 62038;62039;62040 | chr2:178589912;178589911;178589910 | chr2:179454639;179454638;179454637 |
N2AB | 18964 | 57115;57116;57117 | chr2:178589912;178589911;178589910 | chr2:179454639;179454638;179454637 |
N2A | 18037 | 54334;54335;54336 | chr2:178589912;178589911;178589910 | chr2:179454639;179454638;179454637 |
N2B | 11540 | 34843;34844;34845 | chr2:178589912;178589911;178589910 | chr2:179454639;179454638;179454637 |
Novex-1 | 11665 | 35218;35219;35220 | chr2:178589912;178589911;178589910 | chr2:179454639;179454638;179454637 |
Novex-2 | 11732 | 35419;35420;35421 | chr2:178589912;178589911;178589910 | chr2:179454639;179454638;179454637 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs761374262 | -1.546 | 1.0 | N | 0.75 | 0.314 | 0.613267566169 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.9E-05 | 0 |
I/M | rs761374262 | -1.546 | 1.0 | N | 0.75 | 0.314 | 0.613267566169 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
I/M | rs761374262 | -1.546 | 1.0 | N | 0.75 | 0.314 | 0.613267566169 | gnomAD-4.0.0 | 2.6654E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.64535E-05 | 0 | 0 |
I/T | rs140252432 | -2.889 | 1.0 | N | 0.683 | 0.395 | None | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 1.29216E-04 | 0 | None | 0 | 1.68672E-04 | None | 0 | None | 0 | 0 | 1.65782E-04 |
I/T | rs140252432 | -2.889 | 1.0 | N | 0.683 | 0.395 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 6.55E-05 | 0 | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs140252432 | -2.889 | 1.0 | N | 0.683 | 0.395 | None | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
I/T | rs140252432 | -2.889 | 1.0 | N | 0.683 | 0.395 | None | gnomAD-4.0.0 | 7.69038E-06 | None | None | None | None | N | None | 6.75379E-05 | 1.6956E-05 | None | 0 | 2.43499E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs759096564 | -1.864 | 0.993 | N | 0.389 | 0.229 | 0.621134785655 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 8.87E-06 | 0 |
I/V | rs759096564 | -1.864 | 0.993 | N | 0.389 | 0.229 | 0.621134785655 | gnomAD-4.0.0 | 8.21292E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19692E-06 | 4.63843E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8137 | likely_pathogenic | 0.8032 | pathogenic | -2.503 | Highly Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | N |
I/C | 0.9071 | likely_pathogenic | 0.9033 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/D | 0.983 | likely_pathogenic | 0.9801 | pathogenic | -2.894 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
I/E | 0.9339 | likely_pathogenic | 0.9184 | pathogenic | -2.779 | Highly Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/F | 0.5164 | ambiguous | 0.4649 | ambiguous | -1.582 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/G | 0.9786 | likely_pathogenic | 0.9749 | pathogenic | -2.929 | Highly Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/H | 0.8057 | likely_pathogenic | 0.7756 | pathogenic | -2.18 | Highly Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
I/K | 0.7164 | likely_pathogenic | 0.6654 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.519132163 | None | None | N |
I/L | 0.3047 | likely_benign | 0.2853 | benign | -1.31 | Destabilizing | 0.993 | D | 0.387 | neutral | N | 0.510840753 | None | None | N |
I/M | 0.3031 | likely_benign | 0.2757 | benign | -1.208 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.487662614 | None | None | N |
I/N | 0.8108 | likely_pathogenic | 0.7897 | pathogenic | -2.05 | Highly Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
I/P | 0.9963 | likely_pathogenic | 0.9948 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
I/Q | 0.809 | likely_pathogenic | 0.7541 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
I/R | 0.5921 | likely_pathogenic | 0.531 | ambiguous | -1.367 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.467717799 | None | None | N |
I/S | 0.7918 | likely_pathogenic | 0.7655 | pathogenic | -2.66 | Highly Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/T | 0.445 | ambiguous | 0.4208 | ambiguous | -2.43 | Highly Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.504298783 | None | None | N |
I/V | 0.1415 | likely_benign | 0.1407 | benign | -1.686 | Destabilizing | 0.993 | D | 0.389 | neutral | N | 0.46674326 | None | None | N |
I/W | 0.9434 | likely_pathogenic | 0.9255 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
I/Y | 0.8265 | likely_pathogenic | 0.7965 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.