Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20616 | 62071;62072;62073 | chr2:178589879;178589878;178589877 | chr2:179454606;179454605;179454604 |
N2AB | 18975 | 57148;57149;57150 | chr2:178589879;178589878;178589877 | chr2:179454606;179454605;179454604 |
N2A | 18048 | 54367;54368;54369 | chr2:178589879;178589878;178589877 | chr2:179454606;179454605;179454604 |
N2B | 11551 | 34876;34877;34878 | chr2:178589879;178589878;178589877 | chr2:179454606;179454605;179454604 |
Novex-1 | 11676 | 35251;35252;35253 | chr2:178589879;178589878;178589877 | chr2:179454606;179454605;179454604 |
Novex-2 | 11743 | 35452;35453;35454 | chr2:178589879;178589878;178589877 | chr2:179454606;179454605;179454604 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/C | None | None | 0.999 | N | 0.662 | 0.442 | 0.612639375224 | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8595E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9974 | likely_pathogenic | 0.996 | pathogenic | -3.185 | Highly Destabilizing | 0.953 | D | 0.647 | neutral | None | None | None | None | I |
W/C | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -1.394 | Destabilizing | 0.999 | D | 0.662 | neutral | N | 0.511994613 | None | None | I |
W/D | 0.9991 | likely_pathogenic | 0.9988 | pathogenic | -2.36 | Highly Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | I |
W/E | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -2.285 | Highly Destabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | I |
W/F | 0.6938 | likely_pathogenic | 0.6522 | pathogenic | -1.948 | Destabilizing | 0.986 | D | 0.6 | neutral | None | None | None | None | I |
W/G | 0.99 | likely_pathogenic | 0.988 | pathogenic | -3.361 | Highly Destabilizing | 0.997 | D | 0.621 | neutral | N | 0.519120956 | None | None | I |
W/H | 0.996 | likely_pathogenic | 0.9949 | pathogenic | -1.707 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
W/I | 0.9963 | likely_pathogenic | 0.9947 | pathogenic | -2.516 | Highly Destabilizing | 0.973 | D | 0.686 | prob.neutral | None | None | None | None | I |
W/K | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.699 | Destabilizing | 0.993 | D | 0.707 | prob.neutral | None | None | None | None | I |
W/L | 0.9891 | likely_pathogenic | 0.985 | pathogenic | -2.516 | Highly Destabilizing | 0.046 | N | 0.359 | neutral | N | 0.506750693 | None | None | I |
W/M | 0.9972 | likely_pathogenic | 0.9965 | pathogenic | -1.966 | Destabilizing | 0.986 | D | 0.661 | neutral | None | None | None | None | I |
W/N | 0.9981 | likely_pathogenic | 0.9975 | pathogenic | -2.049 | Highly Destabilizing | 0.998 | D | 0.694 | prob.neutral | None | None | None | None | I |
W/P | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -2.759 | Highly Destabilizing | 0.998 | D | 0.694 | prob.neutral | None | None | None | None | I |
W/Q | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -2.112 | Highly Destabilizing | 0.998 | D | 0.658 | neutral | None | None | None | None | I |
W/R | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.061 | Destabilizing | 0.991 | D | 0.704 | prob.neutral | D | 0.526375885 | None | None | I |
W/S | 0.9941 | likely_pathogenic | 0.9913 | pathogenic | -2.422 | Highly Destabilizing | 0.991 | D | 0.717 | prob.delet. | D | 0.536718232 | None | None | I |
W/T | 0.9969 | likely_pathogenic | 0.9953 | pathogenic | -2.3 | Highly Destabilizing | 0.993 | D | 0.633 | neutral | None | None | None | None | I |
W/V | 0.9956 | likely_pathogenic | 0.9935 | pathogenic | -2.759 | Highly Destabilizing | 0.973 | D | 0.662 | neutral | None | None | None | None | I |
W/Y | 0.8469 | likely_pathogenic | 0.8062 | pathogenic | -1.637 | Destabilizing | 0.993 | D | 0.607 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.