Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20619 | 62080;62081;62082 | chr2:178589870;178589869;178589868 | chr2:179454597;179454596;179454595 |
N2AB | 18978 | 57157;57158;57159 | chr2:178589870;178589869;178589868 | chr2:179454597;179454596;179454595 |
N2A | 18051 | 54376;54377;54378 | chr2:178589870;178589869;178589868 | chr2:179454597;179454596;179454595 |
N2B | 11554 | 34885;34886;34887 | chr2:178589870;178589869;178589868 | chr2:179454597;179454596;179454595 |
Novex-1 | 11679 | 35260;35261;35262 | chr2:178589870;178589869;178589868 | chr2:179454597;179454596;179454595 |
Novex-2 | 11746 | 35461;35462;35463 | chr2:178589870;178589869;178589868 | chr2:179454597;179454596;179454595 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1377163743 | None | 0.497 | N | 0.69 | 0.208 | 0.546435761033 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 0 | 0 | 0 |
V/L | None | None | 0.009 | N | 0.369 | 0.093 | 0.318828661733 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5467 | ambiguous | 0.4914 | ambiguous | -1.206 | Destabilizing | 0.104 | N | 0.503 | neutral | D | 0.523828693 | None | None | I |
V/C | 0.9 | likely_pathogenic | 0.8729 | pathogenic | -0.815 | Destabilizing | 0.968 | D | 0.676 | prob.neutral | None | None | None | None | I |
V/D | 0.9851 | likely_pathogenic | 0.9679 | pathogenic | -0.905 | Destabilizing | 0.667 | D | 0.77 | deleterious | D | 0.522261282 | None | None | I |
V/E | 0.9585 | likely_pathogenic | 0.927 | pathogenic | -0.796 | Destabilizing | 0.726 | D | 0.728 | prob.delet. | None | None | None | None | I |
V/F | 0.5902 | likely_pathogenic | 0.5018 | ambiguous | -0.664 | Destabilizing | 0.497 | N | 0.69 | prob.neutral | N | 0.491434823 | None | None | I |
V/G | 0.8605 | likely_pathogenic | 0.778 | pathogenic | -1.622 | Destabilizing | 0.667 | D | 0.743 | deleterious | N | 0.501158513 | None | None | I |
V/H | 0.9811 | likely_pathogenic | 0.9644 | pathogenic | -1.227 | Destabilizing | 0.968 | D | 0.749 | deleterious | None | None | None | None | I |
V/I | 0.0941 | likely_benign | 0.0981 | benign | -0.127 | Destabilizing | None | N | 0.218 | neutral | N | 0.500682475 | None | None | I |
V/K | 0.9672 | likely_pathogenic | 0.9412 | pathogenic | -0.983 | Destabilizing | 0.726 | D | 0.733 | prob.delet. | None | None | None | None | I |
V/L | 0.414 | ambiguous | 0.3802 | ambiguous | -0.127 | Destabilizing | 0.009 | N | 0.369 | neutral | N | 0.467810386 | None | None | I |
V/M | 0.4416 | ambiguous | 0.4015 | ambiguous | -0.18 | Destabilizing | 0.567 | D | 0.59 | neutral | None | None | None | None | I |
V/N | 0.9566 | likely_pathogenic | 0.9257 | pathogenic | -1.048 | Destabilizing | 0.89 | D | 0.766 | deleterious | None | None | None | None | I |
V/P | 0.9581 | likely_pathogenic | 0.9272 | pathogenic | -0.452 | Destabilizing | 0.89 | D | 0.736 | prob.delet. | None | None | None | None | I |
V/Q | 0.9446 | likely_pathogenic | 0.9077 | pathogenic | -0.994 | Destabilizing | 0.89 | D | 0.733 | prob.delet. | None | None | None | None | I |
V/R | 0.9487 | likely_pathogenic | 0.9127 | pathogenic | -0.763 | Destabilizing | 0.726 | D | 0.763 | deleterious | None | None | None | None | I |
V/S | 0.8374 | likely_pathogenic | 0.7574 | pathogenic | -1.659 | Destabilizing | 0.726 | D | 0.671 | neutral | None | None | None | None | I |
V/T | 0.5981 | likely_pathogenic | 0.5291 | ambiguous | -1.412 | Destabilizing | 0.272 | N | 0.508 | neutral | None | None | None | None | I |
V/W | 0.9879 | likely_pathogenic | 0.9788 | pathogenic | -1.021 | Destabilizing | 0.968 | D | 0.722 | prob.delet. | None | None | None | None | I |
V/Y | 0.9484 | likely_pathogenic | 0.923 | pathogenic | -0.608 | Destabilizing | 0.726 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.