Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20620 | 62083;62084;62085 | chr2:178589867;178589866;178589865 | chr2:179454594;179454593;179454592 |
N2AB | 18979 | 57160;57161;57162 | chr2:178589867;178589866;178589865 | chr2:179454594;179454593;179454592 |
N2A | 18052 | 54379;54380;54381 | chr2:178589867;178589866;178589865 | chr2:179454594;179454593;179454592 |
N2B | 11555 | 34888;34889;34890 | chr2:178589867;178589866;178589865 | chr2:179454594;179454593;179454592 |
Novex-1 | 11680 | 35263;35264;35265 | chr2:178589867;178589866;178589865 | chr2:179454594;179454593;179454592 |
Novex-2 | 11747 | 35464;35465;35466 | chr2:178589867;178589866;178589865 | chr2:179454594;179454593;179454592 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.773 | N | 0.59 | 0.204 | 0.453962894745 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4542 | ambiguous | 0.397 | ambiguous | -0.951 | Destabilizing | 0.944 | D | 0.58 | neutral | None | None | None | None | N |
A/D | 0.6211 | likely_pathogenic | 0.597 | pathogenic | -0.776 | Destabilizing | 0.388 | N | 0.576 | neutral | None | None | None | None | N |
A/E | 0.6073 | likely_pathogenic | 0.5747 | pathogenic | -0.797 | Destabilizing | 0.193 | N | 0.555 | neutral | N | 0.463281667 | None | None | N |
A/F | 0.5772 | likely_pathogenic | 0.4677 | ambiguous | -0.811 | Destabilizing | 0.818 | D | 0.594 | neutral | None | None | None | None | N |
A/G | 0.1914 | likely_benign | 0.1952 | benign | -0.99 | Destabilizing | 0.09 | N | 0.517 | neutral | N | 0.415125148 | None | None | N |
A/H | 0.6743 | likely_pathogenic | 0.6223 | pathogenic | -1.109 | Destabilizing | 0.944 | D | 0.533 | neutral | None | None | None | None | N |
A/I | 0.5399 | ambiguous | 0.4748 | ambiguous | -0.18 | Destabilizing | 0.69 | D | 0.59 | neutral | None | None | None | None | N |
A/K | 0.7986 | likely_pathogenic | 0.771 | pathogenic | -1.126 | Destabilizing | 0.241 | N | 0.553 | neutral | None | None | None | None | N |
A/L | 0.3621 | ambiguous | 0.3013 | benign | -0.18 | Destabilizing | 0.388 | N | 0.54 | neutral | None | None | None | None | N |
A/M | 0.4251 | ambiguous | 0.3954 | ambiguous | -0.264 | Destabilizing | 0.932 | D | 0.535 | neutral | None | None | None | None | N |
A/N | 0.4636 | ambiguous | 0.4168 | ambiguous | -0.931 | Destabilizing | 0.241 | N | 0.587 | neutral | None | None | None | None | N |
A/P | 0.9392 | likely_pathogenic | 0.8877 | pathogenic | -0.32 | Destabilizing | 0.773 | D | 0.59 | neutral | N | 0.475096171 | None | None | N |
A/Q | 0.57 | likely_pathogenic | 0.5373 | ambiguous | -1.027 | Destabilizing | 0.69 | D | 0.583 | neutral | None | None | None | None | N |
A/R | 0.746 | likely_pathogenic | 0.699 | pathogenic | -0.827 | Destabilizing | 0.69 | D | 0.587 | neutral | None | None | None | None | N |
A/S | 0.095 | likely_benign | 0.0883 | benign | -1.317 | Destabilizing | None | N | 0.178 | neutral | N | 0.350228307 | None | None | N |
A/T | 0.11 | likely_benign | 0.1115 | benign | -1.227 | Destabilizing | 0.006 | N | 0.199 | neutral | N | 0.409505897 | None | None | N |
A/V | 0.276 | likely_benign | 0.2525 | benign | -0.32 | Destabilizing | 0.324 | N | 0.532 | neutral | N | 0.454560609 | None | None | N |
A/W | 0.9038 | likely_pathogenic | 0.846 | pathogenic | -1.161 | Destabilizing | 0.981 | D | 0.606 | neutral | None | None | None | None | N |
A/Y | 0.7097 | likely_pathogenic | 0.6076 | pathogenic | -0.734 | Destabilizing | 0.818 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.