Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20622 | 62089;62090;62091 | chr2:178589861;178589860;178589859 | chr2:179454588;179454587;179454586 |
N2AB | 18981 | 57166;57167;57168 | chr2:178589861;178589860;178589859 | chr2:179454588;179454587;179454586 |
N2A | 18054 | 54385;54386;54387 | chr2:178589861;178589860;178589859 | chr2:179454588;179454587;179454586 |
N2B | 11557 | 34894;34895;34896 | chr2:178589861;178589860;178589859 | chr2:179454588;179454587;179454586 |
Novex-1 | 11682 | 35269;35270;35271 | chr2:178589861;178589860;178589859 | chr2:179454588;179454587;179454586 |
Novex-2 | 11749 | 35470;35471;35472 | chr2:178589861;178589860;178589859 | chr2:179454588;179454587;179454586 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.006 | N | 0.179 | 0.108 | 0.259761712551 | gnomAD-4.0.0 | 1.59201E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.76781E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3849 | ambiguous | 0.3944 | ambiguous | -0.078 | Destabilizing | 0.324 | N | 0.384 | neutral | N | 0.442172889 | None | None | I |
D/C | 0.8432 | likely_pathogenic | 0.8504 | pathogenic | 0.288 | Stabilizing | 0.981 | D | 0.473 | neutral | None | None | None | None | I |
D/E | 0.2729 | likely_benign | 0.2989 | benign | -0.23 | Destabilizing | 0.006 | N | 0.179 | neutral | N | 0.464972391 | None | None | I |
D/F | 0.8518 | likely_pathogenic | 0.8465 | pathogenic | -0.254 | Destabilizing | 0.818 | D | 0.413 | neutral | None | None | None | None | I |
D/G | 0.323 | likely_benign | 0.3684 | ambiguous | -0.219 | Destabilizing | 0.193 | N | 0.365 | neutral | N | 0.46223873 | None | None | I |
D/H | 0.5366 | ambiguous | 0.5573 | ambiguous | -0.021 | Destabilizing | 0.003 | N | 0.252 | neutral | N | 0.471823792 | None | None | I |
D/I | 0.7659 | likely_pathogenic | 0.7268 | pathogenic | 0.228 | Stabilizing | 0.818 | D | 0.421 | neutral | None | None | None | None | I |
D/K | 0.664 | likely_pathogenic | 0.6612 | pathogenic | 0.617 | Stabilizing | 0.241 | N | 0.343 | neutral | None | None | None | None | I |
D/L | 0.7295 | likely_pathogenic | 0.6938 | pathogenic | 0.228 | Stabilizing | 0.69 | D | 0.391 | neutral | None | None | None | None | I |
D/M | 0.8616 | likely_pathogenic | 0.84 | pathogenic | 0.346 | Stabilizing | 0.981 | D | 0.409 | neutral | None | None | None | None | I |
D/N | 0.1407 | likely_benign | 0.1555 | benign | 0.429 | Stabilizing | 0.001 | N | 0.105 | neutral | N | 0.431841252 | None | None | I |
D/P | 0.9039 | likely_pathogenic | 0.8875 | pathogenic | 0.147 | Stabilizing | 0.818 | D | 0.372 | neutral | None | None | None | None | I |
D/Q | 0.6107 | likely_pathogenic | 0.6154 | pathogenic | 0.42 | Stabilizing | 0.69 | D | 0.351 | neutral | None | None | None | None | I |
D/R | 0.707 | likely_pathogenic | 0.7132 | pathogenic | 0.664 | Stabilizing | 0.69 | D | 0.377 | neutral | None | None | None | None | I |
D/S | 0.236 | likely_benign | 0.2495 | benign | 0.342 | Stabilizing | 0.241 | N | 0.346 | neutral | None | None | None | None | I |
D/T | 0.4151 | ambiguous | 0.403 | ambiguous | 0.448 | Stabilizing | 0.241 | N | 0.385 | neutral | None | None | None | None | I |
D/V | 0.5576 | ambiguous | 0.5178 | ambiguous | 0.147 | Stabilizing | 0.773 | D | 0.397 | neutral | N | 0.459163926 | None | None | I |
D/W | 0.9716 | likely_pathogenic | 0.9666 | pathogenic | -0.211 | Destabilizing | 0.981 | D | 0.567 | neutral | None | None | None | None | I |
D/Y | 0.5204 | ambiguous | 0.4949 | ambiguous | -0.025 | Destabilizing | 0.627 | D | 0.425 | neutral | N | 0.498759677 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.