Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20627 | 62104;62105;62106 | chr2:178589846;178589845;178589844 | chr2:179454573;179454572;179454571 |
N2AB | 18986 | 57181;57182;57183 | chr2:178589846;178589845;178589844 | chr2:179454573;179454572;179454571 |
N2A | 18059 | 54400;54401;54402 | chr2:178589846;178589845;178589844 | chr2:179454573;179454572;179454571 |
N2B | 11562 | 34909;34910;34911 | chr2:178589846;178589845;178589844 | chr2:179454573;179454572;179454571 |
Novex-1 | 11687 | 35284;35285;35286 | chr2:178589846;178589845;178589844 | chr2:179454573;179454572;179454571 |
Novex-2 | 11754 | 35485;35486;35487 | chr2:178589846;178589845;178589844 | chr2:179454573;179454572;179454571 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.001 | N | 0.479 | 0.32 | 0.527809512145 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3053 | likely_benign | 0.2768 | benign | -1.296 | Destabilizing | 0.116 | N | 0.447 | neutral | None | None | None | None | N |
L/C | 0.483 | ambiguous | 0.427 | ambiguous | -0.88 | Destabilizing | 0.944 | D | 0.494 | neutral | None | None | None | None | N |
L/D | 0.8198 | likely_pathogenic | 0.7773 | pathogenic | -0.552 | Destabilizing | 0.69 | D | 0.592 | neutral | None | None | None | None | N |
L/E | 0.5142 | ambiguous | 0.4636 | ambiguous | -0.51 | Destabilizing | 0.241 | N | 0.56 | neutral | None | None | None | None | N |
L/F | 0.1614 | likely_benign | 0.1569 | benign | -0.674 | Destabilizing | 0.627 | D | 0.46 | neutral | N | 0.415719793 | None | None | N |
L/G | 0.6514 | likely_pathogenic | 0.6218 | pathogenic | -1.631 | Destabilizing | 0.241 | N | 0.557 | neutral | None | None | None | None | N |
L/H | 0.3058 | likely_benign | 0.2794 | benign | -0.673 | Destabilizing | 0.944 | D | 0.6 | neutral | None | None | None | None | N |
L/I | 0.092 | likely_benign | 0.0936 | benign | -0.447 | Destabilizing | 0.193 | N | 0.426 | neutral | N | 0.46686069 | None | None | N |
L/K | 0.4024 | ambiguous | 0.3487 | ambiguous | -0.877 | Destabilizing | 0.004 | N | 0.407 | neutral | None | None | None | None | N |
L/M | 0.0981 | likely_benign | 0.0973 | benign | -0.499 | Destabilizing | 0.008 | N | 0.349 | neutral | None | None | None | None | N |
L/N | 0.4038 | ambiguous | 0.3633 | ambiguous | -0.868 | Destabilizing | 0.527 | D | 0.591 | neutral | None | None | None | None | N |
L/P | 0.8514 | likely_pathogenic | 0.8569 | pathogenic | -0.698 | Destabilizing | 0.69 | D | 0.593 | neutral | None | None | None | None | N |
L/Q | 0.2057 | likely_benign | 0.188 | benign | -0.941 | Destabilizing | 0.69 | D | 0.571 | neutral | None | None | None | None | N |
L/R | 0.3961 | ambiguous | 0.351 | ambiguous | -0.368 | Destabilizing | 0.241 | N | 0.555 | neutral | None | None | None | None | N |
L/S | 0.358 | ambiguous | 0.3243 | benign | -1.507 | Destabilizing | 0.001 | N | 0.479 | neutral | N | 0.474365452 | None | None | N |
L/T | 0.2295 | likely_benign | 0.2087 | benign | -1.339 | Destabilizing | 0.241 | N | 0.433 | neutral | None | None | None | None | N |
L/V | 0.091 | likely_benign | 0.0925 | benign | -0.698 | Destabilizing | 0.09 | N | 0.462 | neutral | N | 0.463046807 | None | None | N |
L/W | 0.3716 | ambiguous | 0.31 | benign | -0.77 | Destabilizing | 0.981 | D | 0.611 | neutral | None | None | None | None | N |
L/Y | 0.3777 | ambiguous | 0.3317 | benign | -0.525 | Destabilizing | 0.818 | D | 0.51 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.