Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20629 | 62110;62111;62112 | chr2:178589840;178589839;178589838 | chr2:179454567;179454566;179454565 |
N2AB | 18988 | 57187;57188;57189 | chr2:178589840;178589839;178589838 | chr2:179454567;179454566;179454565 |
N2A | 18061 | 54406;54407;54408 | chr2:178589840;178589839;178589838 | chr2:179454567;179454566;179454565 |
N2B | 11564 | 34915;34916;34917 | chr2:178589840;178589839;178589838 | chr2:179454567;179454566;179454565 |
Novex-1 | 11689 | 35290;35291;35292 | chr2:178589840;178589839;178589838 | chr2:179454567;179454566;179454565 |
Novex-2 | 11756 | 35491;35492;35493 | chr2:178589840;178589839;178589838 | chr2:179454567;179454566;179454565 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | N | 0.629 | 0.482 | 0.377451072189 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7952 | likely_pathogenic | 0.7028 | pathogenic | -0.286 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
K/C | 0.8977 | likely_pathogenic | 0.8387 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
K/D | 0.9154 | likely_pathogenic | 0.8644 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
K/E | 0.5998 | likely_pathogenic | 0.5071 | ambiguous | -0.026 | Destabilizing | 0.999 | D | 0.629 | neutral | N | 0.498004961 | None | None | I |
K/F | 0.9539 | likely_pathogenic | 0.9244 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
K/G | 0.8954 | likely_pathogenic | 0.8325 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
K/H | 0.5373 | ambiguous | 0.4688 | ambiguous | -0.966 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
K/I | 0.7242 | likely_pathogenic | 0.5935 | pathogenic | 0.404 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
K/L | 0.7618 | likely_pathogenic | 0.6579 | pathogenic | 0.404 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
K/M | 0.6375 | likely_pathogenic | 0.5342 | ambiguous | 0.374 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.519268236 | None | None | I |
K/N | 0.8446 | likely_pathogenic | 0.7679 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.475292351 | None | None | I |
K/P | 0.8862 | likely_pathogenic | 0.804 | pathogenic | 0.204 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/Q | 0.3383 | likely_benign | 0.2698 | benign | -0.275 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.467276953 | None | None | I |
K/R | 0.1302 | likely_benign | 0.118 | benign | -0.327 | Destabilizing | 0.999 | D | 0.61 | neutral | N | 0.516652005 | None | None | I |
K/S | 0.8333 | likely_pathogenic | 0.7569 | pathogenic | -0.668 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
K/T | 0.4556 | ambiguous | 0.3785 | ambiguous | -0.449 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.496372733 | None | None | I |
K/V | 0.6429 | likely_pathogenic | 0.5347 | ambiguous | 0.204 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/W | 0.9481 | likely_pathogenic | 0.9139 | pathogenic | -0.218 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
K/Y | 0.891 | likely_pathogenic | 0.8289 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.