Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20632 | 62119;62120;62121 | chr2:178589831;178589830;178589829 | chr2:179454558;179454557;179454556 |
N2AB | 18991 | 57196;57197;57198 | chr2:178589831;178589830;178589829 | chr2:179454558;179454557;179454556 |
N2A | 18064 | 54415;54416;54417 | chr2:178589831;178589830;178589829 | chr2:179454558;179454557;179454556 |
N2B | 11567 | 34924;34925;34926 | chr2:178589831;178589830;178589829 | chr2:179454558;179454557;179454556 |
Novex-1 | 11692 | 35299;35300;35301 | chr2:178589831;178589830;178589829 | chr2:179454558;179454557;179454556 |
Novex-2 | 11759 | 35500;35501;35502 | chr2:178589831;178589830;178589829 | chr2:179454558;179454557;179454556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | D | 0.812 | 0.745 | 0.950074274778 | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.972 | likely_pathogenic | 0.9476 | pathogenic | -2.591 | Highly Destabilizing | 0.997 | D | 0.789 | deleterious | None | None | None | None | I |
L/C | 0.9695 | likely_pathogenic | 0.9179 | pathogenic | -2.363 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
L/D | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | -3.282 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
L/E | 0.9955 | likely_pathogenic | 0.9943 | pathogenic | -3.072 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
L/F | 0.8247 | likely_pathogenic | 0.7975 | pathogenic | -1.655 | Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.609953219 | None | None | I |
L/G | 0.9873 | likely_pathogenic | 0.9767 | pathogenic | -3.123 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
L/H | 0.9915 | likely_pathogenic | 0.988 | pathogenic | -2.655 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | D | 0.636298548 | None | None | I |
L/I | 0.3502 | ambiguous | 0.3001 | benign | -1.053 | Destabilizing | 0.992 | D | 0.783 | deleterious | D | 0.597103801 | None | None | I |
L/K | 0.989 | likely_pathogenic | 0.9847 | pathogenic | -2.029 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
L/M | 0.4936 | ambiguous | 0.4508 | ambiguous | -1.209 | Destabilizing | 0.985 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/N | 0.9912 | likely_pathogenic | 0.9876 | pathogenic | -2.439 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
L/P | 0.9938 | likely_pathogenic | 0.9893 | pathogenic | -1.547 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.652317909 | None | None | I |
L/Q | 0.9837 | likely_pathogenic | 0.9798 | pathogenic | -2.325 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
L/R | 0.9839 | likely_pathogenic | 0.9789 | pathogenic | -1.724 | Destabilizing | 0.999 | D | 0.82 | deleterious | D | 0.652317909 | None | None | I |
L/S | 0.9947 | likely_pathogenic | 0.9899 | pathogenic | -3.1 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
L/T | 0.9687 | likely_pathogenic | 0.9415 | pathogenic | -2.742 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
L/V | 0.5058 | ambiguous | 0.3925 | ambiguous | -1.547 | Destabilizing | 0.992 | D | 0.772 | deleterious | D | 0.597911018 | None | None | I |
L/W | 0.99 | likely_pathogenic | 0.9877 | pathogenic | -2.079 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
L/Y | 0.9862 | likely_pathogenic | 0.9816 | pathogenic | -1.81 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.