Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20635 | 62128;62129;62130 | chr2:178589822;178589821;178589820 | chr2:179454549;179454548;179454547 |
N2AB | 18994 | 57205;57206;57207 | chr2:178589822;178589821;178589820 | chr2:179454549;179454548;179454547 |
N2A | 18067 | 54424;54425;54426 | chr2:178589822;178589821;178589820 | chr2:179454549;179454548;179454547 |
N2B | 11570 | 34933;34934;34935 | chr2:178589822;178589821;178589820 | chr2:179454549;179454548;179454547 |
Novex-1 | 11695 | 35308;35309;35310 | chr2:178589822;178589821;178589820 | chr2:179454549;179454548;179454547 |
Novex-2 | 11762 | 35509;35510;35511 | chr2:178589822;178589821;178589820 | chr2:179454549;179454548;179454547 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs2049831678 | None | 0.979 | N | 0.443 | 0.289 | 0.202949470691 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs749547976 | 0.466 | 0.979 | N | 0.454 | 0.246 | 0.144782658237 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
N/K | rs749547976 | 0.466 | 0.979 | N | 0.454 | 0.246 | 0.144782658237 | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77624E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5642 | likely_pathogenic | 0.4551 | ambiguous | -0.334 | Destabilizing | 0.927 | D | 0.558 | neutral | None | None | None | None | I |
N/C | 0.6137 | likely_pathogenic | 0.515 | ambiguous | 0.309 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
N/D | 0.2609 | likely_benign | 0.1838 | benign | 0.101 | Stabilizing | 0.979 | D | 0.443 | neutral | N | 0.483616867 | None | None | I |
N/E | 0.6838 | likely_pathogenic | 0.5237 | ambiguous | 0.072 | Stabilizing | 0.969 | D | 0.414 | neutral | None | None | None | None | I |
N/F | 0.8661 | likely_pathogenic | 0.7841 | pathogenic | -0.691 | Destabilizing | 0.995 | D | 0.608 | neutral | None | None | None | None | I |
N/G | 0.277 | likely_benign | 0.2388 | benign | -0.514 | Destabilizing | 0.013 | N | 0.19 | neutral | None | None | None | None | I |
N/H | 0.2623 | likely_benign | 0.1977 | benign | -0.5 | Destabilizing | 0.144 | N | 0.313 | neutral | N | 0.514574492 | None | None | I |
N/I | 0.8696 | likely_pathogenic | 0.7667 | pathogenic | 0.053 | Stabilizing | 0.998 | D | 0.601 | neutral | N | 0.495437748 | None | None | I |
N/K | 0.7035 | likely_pathogenic | 0.5134 | ambiguous | 0.084 | Stabilizing | 0.979 | D | 0.454 | neutral | N | 0.511784903 | None | None | I |
N/L | 0.6592 | likely_pathogenic | 0.5506 | ambiguous | 0.053 | Stabilizing | 0.995 | D | 0.589 | neutral | None | None | None | None | I |
N/M | 0.7698 | likely_pathogenic | 0.6731 | pathogenic | 0.317 | Stabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | I |
N/P | 0.9323 | likely_pathogenic | 0.9197 | pathogenic | -0.049 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | I |
N/Q | 0.5916 | likely_pathogenic | 0.4623 | ambiguous | -0.361 | Destabilizing | 0.995 | D | 0.448 | neutral | None | None | None | None | I |
N/R | 0.721 | likely_pathogenic | 0.5569 | ambiguous | 0.148 | Stabilizing | 0.995 | D | 0.443 | neutral | None | None | None | None | I |
N/S | 0.1473 | likely_benign | 0.1296 | benign | -0.152 | Destabilizing | 0.906 | D | 0.458 | neutral | N | 0.508128522 | None | None | I |
N/T | 0.4405 | ambiguous | 0.3405 | ambiguous | -0.035 | Destabilizing | 0.979 | D | 0.461 | neutral | N | 0.468179234 | None | None | I |
N/V | 0.8124 | likely_pathogenic | 0.7032 | pathogenic | -0.049 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | I |
N/W | 0.95 | likely_pathogenic | 0.92 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
N/Y | 0.4421 | ambiguous | 0.3441 | ambiguous | -0.412 | Destabilizing | 0.988 | D | 0.597 | neutral | N | 0.494545936 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.