Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20636 | 62131;62132;62133 | chr2:178589819;178589818;178589817 | chr2:179454546;179454545;179454544 |
N2AB | 18995 | 57208;57209;57210 | chr2:178589819;178589818;178589817 | chr2:179454546;179454545;179454544 |
N2A | 18068 | 54427;54428;54429 | chr2:178589819;178589818;178589817 | chr2:179454546;179454545;179454544 |
N2B | 11571 | 34936;34937;34938 | chr2:178589819;178589818;178589817 | chr2:179454546;179454545;179454544 |
Novex-1 | 11696 | 35311;35312;35313 | chr2:178589819;178589818;178589817 | chr2:179454546;179454545;179454544 |
Novex-2 | 11763 | 35512;35513;35514 | chr2:178589819;178589818;178589817 | chr2:179454546;179454545;179454544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs2154184029 | None | 0.042 | N | 0.235 | 0.118 | 0.101711395817 | gnomAD-4.0.0 | 2.05294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69875E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2724 | likely_benign | 0.2491 | benign | -0.97 | Destabilizing | 0.104 | N | 0.233 | neutral | None | None | None | None | I |
N/C | 0.1807 | likely_benign | 0.1833 | benign | -0.09 | Destabilizing | 0.958 | D | 0.396 | neutral | None | None | None | None | I |
N/D | 0.3266 | likely_benign | 0.2117 | benign | -0.802 | Destabilizing | None | N | 0.073 | neutral | N | 0.476786834 | None | None | I |
N/E | 0.4903 | ambiguous | 0.3489 | ambiguous | -0.623 | Destabilizing | 0.055 | N | 0.205 | neutral | None | None | None | None | I |
N/F | 0.6604 | likely_pathogenic | 0.6369 | pathogenic | -0.514 | Destabilizing | 0.667 | D | 0.457 | neutral | None | None | None | None | I |
N/G | 0.3765 | ambiguous | 0.3603 | ambiguous | -1.371 | Destabilizing | 0.104 | N | 0.217 | neutral | None | None | None | None | I |
N/H | 0.114 | likely_benign | 0.0979 | benign | -0.864 | Destabilizing | None | N | 0.05 | neutral | N | 0.436999143 | None | None | I |
N/I | 0.3698 | ambiguous | 0.332 | benign | 0.089 | Stabilizing | 0.602 | D | 0.481 | neutral | N | 0.495180655 | None | None | I |
N/K | 0.5855 | likely_pathogenic | 0.446 | ambiguous | -0.267 | Destabilizing | 0.001 | N | 0.087 | neutral | N | 0.472957156 | None | None | I |
N/L | 0.4185 | ambiguous | 0.3683 | ambiguous | 0.089 | Stabilizing | 0.22 | N | 0.323 | neutral | None | None | None | None | I |
N/M | 0.3976 | ambiguous | 0.3784 | ambiguous | 0.384 | Stabilizing | 0.859 | D | 0.389 | neutral | None | None | None | None | I |
N/P | 0.9837 | likely_pathogenic | 0.9672 | pathogenic | -0.235 | Destabilizing | 0.364 | N | 0.421 | neutral | None | None | None | None | I |
N/Q | 0.3289 | likely_benign | 0.273 | benign | -0.809 | Destabilizing | 0.22 | N | 0.217 | neutral | None | None | None | None | I |
N/R | 0.5405 | ambiguous | 0.4073 | ambiguous | -0.393 | Destabilizing | None | N | 0.109 | neutral | None | None | None | None | I |
N/S | 0.0831 | likely_benign | 0.0817 | benign | -1.122 | Destabilizing | 0.042 | N | 0.235 | neutral | N | 0.4776509 | None | None | I |
N/T | 0.1306 | likely_benign | 0.1242 | benign | -0.735 | Destabilizing | 0.081 | N | 0.2 | neutral | N | 0.440684448 | None | None | I |
N/V | 0.2927 | likely_benign | 0.2664 | benign | -0.235 | Destabilizing | 0.364 | N | 0.423 | neutral | None | None | None | None | I |
N/W | 0.8656 | likely_pathogenic | 0.8152 | pathogenic | -0.3 | Destabilizing | 0.958 | D | 0.421 | neutral | None | None | None | None | I |
N/Y | 0.2241 | likely_benign | 0.1936 | benign | -0.046 | Destabilizing | 0.175 | N | 0.421 | neutral | N | 0.477293813 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.