Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20642 | 62149;62150;62151 | chr2:178589801;178589800;178589799 | chr2:179454528;179454527;179454526 |
N2AB | 19001 | 57226;57227;57228 | chr2:178589801;178589800;178589799 | chr2:179454528;179454527;179454526 |
N2A | 18074 | 54445;54446;54447 | chr2:178589801;178589800;178589799 | chr2:179454528;179454527;179454526 |
N2B | 11577 | 34954;34955;34956 | chr2:178589801;178589800;178589799 | chr2:179454528;179454527;179454526 |
Novex-1 | 11702 | 35329;35330;35331 | chr2:178589801;178589800;178589799 | chr2:179454528;179454527;179454526 |
Novex-2 | 11769 | 35530;35531;35532 | chr2:178589801;178589800;178589799 | chr2:179454528;179454527;179454526 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.997 | D | 0.655 | 0.596 | 0.790187556284 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88232E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.931 | likely_pathogenic | 0.9142 | pathogenic | -2.336 | Highly Destabilizing | 0.999 | D | 0.646 | neutral | D | 0.569267023 | None | None | N |
V/C | 0.9743 | likely_pathogenic | 0.969 | pathogenic | -1.799 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
V/D | 0.9991 | likely_pathogenic | 0.9986 | pathogenic | -3.417 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.631805312 | None | None | N |
V/E | 0.9974 | likely_pathogenic | 0.9961 | pathogenic | -3.141 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/F | 0.9661 | likely_pathogenic | 0.9504 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.551162768 | None | None | N |
V/G | 0.9621 | likely_pathogenic | 0.9464 | pathogenic | -2.885 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.631805312 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -2.777 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.1383 | likely_benign | 0.1298 | benign | -0.751 | Destabilizing | 0.997 | D | 0.612 | neutral | D | 0.53689207 | None | None | N |
V/K | 0.998 | likely_pathogenic | 0.997 | pathogenic | -2.012 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/L | 0.8674 | likely_pathogenic | 0.8215 | pathogenic | -0.751 | Destabilizing | 0.997 | D | 0.655 | neutral | D | 0.529002681 | None | None | N |
V/M | 0.9303 | likely_pathogenic | 0.9102 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/N | 0.9969 | likely_pathogenic | 0.9949 | pathogenic | -2.557 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/P | 0.9984 | likely_pathogenic | 0.9973 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/Q | 0.9971 | likely_pathogenic | 0.996 | pathogenic | -2.292 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/R | 0.9955 | likely_pathogenic | 0.9934 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
V/S | 0.9846 | likely_pathogenic | 0.9791 | pathogenic | -3.042 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/T | 0.9521 | likely_pathogenic | 0.9479 | pathogenic | -2.634 | Highly Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -1.986 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/Y | 0.9967 | likely_pathogenic | 0.9948 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.