Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20648 | 62167;62168;62169 | chr2:178589783;178589782;178589781 | chr2:179454510;179454509;179454508 |
N2AB | 19007 | 57244;57245;57246 | chr2:178589783;178589782;178589781 | chr2:179454510;179454509;179454508 |
N2A | 18080 | 54463;54464;54465 | chr2:178589783;178589782;178589781 | chr2:179454510;179454509;179454508 |
N2B | 11583 | 34972;34973;34974 | chr2:178589783;178589782;178589781 | chr2:179454510;179454509;179454508 |
Novex-1 | 11708 | 35347;35348;35349 | chr2:178589783;178589782;178589781 | chr2:179454510;179454509;179454508 |
Novex-2 | 11775 | 35548;35549;35550 | chr2:178589783;178589782;178589781 | chr2:179454510;179454509;179454508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1576076651 | None | 0.966 | N | 0.555 | 0.473 | 0.558264529485 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5489 | ambiguous | 0.509 | ambiguous | -0.429 | Destabilizing | 0.625 | D | 0.317 | neutral | N | 0.417007873 | None | None | I |
V/C | 0.7895 | likely_pathogenic | 0.7821 | pathogenic | -0.681 | Destabilizing | 0.037 | N | 0.354 | neutral | None | None | None | None | I |
V/D | 0.9254 | likely_pathogenic | 0.9207 | pathogenic | -0.202 | Destabilizing | 0.991 | D | 0.569 | neutral | None | None | None | None | I |
V/E | 0.8946 | likely_pathogenic | 0.8902 | pathogenic | -0.323 | Destabilizing | 0.989 | D | 0.563 | neutral | N | 0.474093306 | None | None | I |
V/F | 0.3004 | likely_benign | 0.3455 | ambiguous | -0.667 | Destabilizing | 0.949 | D | 0.449 | neutral | None | None | None | None | I |
V/G | 0.7269 | likely_pathogenic | 0.5701 | pathogenic | -0.544 | Destabilizing | 0.966 | D | 0.555 | neutral | N | 0.506339011 | None | None | I |
V/H | 0.9254 | likely_pathogenic | 0.9393 | pathogenic | -0.042 | Destabilizing | 0.998 | D | 0.555 | neutral | None | None | None | None | I |
V/I | 0.1208 | likely_benign | 0.1165 | benign | -0.282 | Destabilizing | 0.005 | N | 0.179 | neutral | N | 0.393787083 | None | None | I |
V/K | 0.9618 | likely_pathogenic | 0.9655 | pathogenic | -0.338 | Destabilizing | 0.974 | D | 0.553 | neutral | None | None | None | None | I |
V/L | 0.5878 | likely_pathogenic | 0.5851 | pathogenic | -0.282 | Destabilizing | 0.267 | N | 0.271 | neutral | N | 0.453296747 | None | None | I |
V/M | 0.4401 | ambiguous | 0.4485 | ambiguous | -0.352 | Destabilizing | 0.325 | N | 0.281 | neutral | None | None | None | None | I |
V/N | 0.7859 | likely_pathogenic | 0.7994 | pathogenic | -0.114 | Destabilizing | 0.991 | D | 0.563 | neutral | None | None | None | None | I |
V/P | 0.98 | likely_pathogenic | 0.9807 | pathogenic | -0.297 | Destabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | I |
V/Q | 0.8987 | likely_pathogenic | 0.9034 | pathogenic | -0.379 | Destabilizing | 0.974 | D | 0.555 | neutral | None | None | None | None | I |
V/R | 0.9131 | likely_pathogenic | 0.9237 | pathogenic | 0.201 | Stabilizing | 0.974 | D | 0.563 | neutral | None | None | None | None | I |
V/S | 0.6989 | likely_pathogenic | 0.671 | pathogenic | -0.493 | Destabilizing | 0.915 | D | 0.519 | neutral | None | None | None | None | I |
V/T | 0.5526 | ambiguous | 0.5385 | ambiguous | -0.513 | Destabilizing | 0.842 | D | 0.279 | neutral | None | None | None | None | I |
V/W | 0.9298 | likely_pathogenic | 0.9499 | pathogenic | -0.71 | Destabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | I |
V/Y | 0.717 | likely_pathogenic | 0.7741 | pathogenic | -0.414 | Destabilizing | 0.991 | D | 0.442 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.