Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20654 | 62185;62186;62187 | chr2:178589765;178589764;178589763 | chr2:179454492;179454491;179454490 |
N2AB | 19013 | 57262;57263;57264 | chr2:178589765;178589764;178589763 | chr2:179454492;179454491;179454490 |
N2A | 18086 | 54481;54482;54483 | chr2:178589765;178589764;178589763 | chr2:179454492;179454491;179454490 |
N2B | 11589 | 34990;34991;34992 | chr2:178589765;178589764;178589763 | chr2:179454492;179454491;179454490 |
Novex-1 | 11714 | 35365;35366;35367 | chr2:178589765;178589764;178589763 | chr2:179454492;179454491;179454490 |
Novex-2 | 11781 | 35566;35567;35568 | chr2:178589765;178589764;178589763 | chr2:179454492;179454491;179454490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1244996285 | -2.003 | 0.016 | N | 0.361 | 0.093 | 0.33085137897 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/T | rs1244996285 | -2.003 | 0.016 | N | 0.361 | 0.093 | 0.33085137897 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1941 | likely_benign | 0.1842 | benign | -1.657 | Destabilizing | 0.25 | N | 0.479 | neutral | None | None | None | None | I |
I/C | 0.6324 | likely_pathogenic | 0.5946 | pathogenic | -0.97 | Destabilizing | 0.977 | D | 0.54 | neutral | None | None | None | None | I |
I/D | 0.7806 | likely_pathogenic | 0.6985 | pathogenic | -0.938 | Destabilizing | 0.92 | D | 0.596 | neutral | None | None | None | None | I |
I/E | 0.5532 | ambiguous | 0.4692 | ambiguous | -0.932 | Destabilizing | 0.92 | D | 0.593 | neutral | None | None | None | None | I |
I/F | 0.2779 | likely_benign | 0.2475 | benign | -1.13 | Destabilizing | 0.81 | D | 0.552 | neutral | N | 0.453368531 | None | None | I |
I/G | 0.6491 | likely_pathogenic | 0.609 | pathogenic | -1.983 | Destabilizing | 0.766 | D | 0.591 | neutral | None | None | None | None | I |
I/H | 0.6465 | likely_pathogenic | 0.5793 | pathogenic | -1.166 | Destabilizing | 0.992 | D | 0.626 | neutral | None | None | None | None | I |
I/K | 0.4351 | ambiguous | 0.3511 | ambiguous | -1.068 | Destabilizing | 0.85 | D | 0.593 | neutral | None | None | None | None | I |
I/L | 0.1442 | likely_benign | 0.1583 | benign | -0.834 | Destabilizing | 0.099 | N | 0.443 | neutral | N | 0.348259863 | None | None | I |
I/M | 0.1066 | likely_benign | 0.1034 | benign | -0.662 | Destabilizing | 0.916 | D | 0.555 | neutral | N | 0.453541889 | None | None | I |
I/N | 0.3226 | likely_benign | 0.2714 | benign | -0.862 | Destabilizing | 0.896 | D | 0.595 | neutral | N | 0.453541889 | None | None | I |
I/P | 0.9332 | likely_pathogenic | 0.9308 | pathogenic | -1.077 | Destabilizing | 0.972 | D | 0.595 | neutral | None | None | None | None | I |
I/Q | 0.4524 | ambiguous | 0.3808 | ambiguous | -1.04 | Destabilizing | 0.972 | D | 0.625 | neutral | None | None | None | None | I |
I/R | 0.3582 | ambiguous | 0.2861 | benign | -0.498 | Destabilizing | 0.92 | D | 0.596 | neutral | None | None | None | None | I |
I/S | 0.2606 | likely_benign | 0.2238 | benign | -1.505 | Destabilizing | 0.379 | N | 0.531 | neutral | N | 0.441753523 | None | None | I |
I/T | 0.1006 | likely_benign | 0.0879 | benign | -1.385 | Destabilizing | 0.016 | N | 0.361 | neutral | N | 0.374387672 | None | None | I |
I/V | 0.0621 | likely_benign | 0.0597 | benign | -1.077 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.374734389 | None | None | I |
I/W | 0.9032 | likely_pathogenic | 0.8572 | pathogenic | -1.179 | Destabilizing | 0.992 | D | 0.667 | neutral | None | None | None | None | I |
I/Y | 0.6681 | likely_pathogenic | 0.6193 | pathogenic | -0.961 | Destabilizing | 0.92 | D | 0.537 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.