Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20655 | 62188;62189;62190 | chr2:178589762;178589761;178589760 | chr2:179454489;179454488;179454487 |
N2AB | 19014 | 57265;57266;57267 | chr2:178589762;178589761;178589760 | chr2:179454489;179454488;179454487 |
N2A | 18087 | 54484;54485;54486 | chr2:178589762;178589761;178589760 | chr2:179454489;179454488;179454487 |
N2B | 11590 | 34993;34994;34995 | chr2:178589762;178589761;178589760 | chr2:179454489;179454488;179454487 |
Novex-1 | 11715 | 35368;35369;35370 | chr2:178589762;178589761;178589760 | chr2:179454489;179454488;179454487 |
Novex-2 | 11782 | 35569;35570;35571 | chr2:178589762;178589761;178589760 | chr2:179454489;179454488;179454487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs776314797 | -0.221 | 1.0 | N | 0.781 | 0.391 | 0.360565625551 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 2.67E-05 | 0 |
E/K | rs776314797 | -0.221 | 1.0 | N | 0.781 | 0.391 | 0.360565625551 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/K | rs776314797 | -0.221 | 1.0 | N | 0.781 | 0.391 | 0.360565625551 | gnomAD-4.0.0 | 4.46266E-05 | None | None | None | None | N | None | 5.34102E-05 | 1.66761E-05 | None | 0 | 0 | None | 0 | 0 | 5.25607E-05 | 4.39223E-05 | 1.60149E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.695 | likely_pathogenic | 0.7218 | pathogenic | -0.39 | Destabilizing | 0.997 | D | 0.785 | deleterious | N | 0.514475704 | None | None | N |
E/C | 0.9838 | likely_pathogenic | 0.9843 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/D | 0.6319 | likely_pathogenic | 0.7045 | pathogenic | -0.924 | Destabilizing | 0.997 | D | 0.729 | deleterious | N | 0.466997011 | None | None | N |
E/F | 0.9833 | likely_pathogenic | 0.988 | pathogenic | 0.521 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
E/G | 0.8675 | likely_pathogenic | 0.8879 | pathogenic | -0.823 | Destabilizing | 0.999 | D | 0.739 | deleterious | N | 0.478570807 | None | None | N |
E/H | 0.9577 | likely_pathogenic | 0.9645 | pathogenic | 0.37 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/I | 0.8704 | likely_pathogenic | 0.8876 | pathogenic | 0.809 | Stabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
E/K | 0.8286 | likely_pathogenic | 0.7924 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.476075591 | None | None | N |
E/L | 0.9314 | likely_pathogenic | 0.9459 | pathogenic | 0.809 | Stabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
E/M | 0.9146 | likely_pathogenic | 0.9233 | pathogenic | 1.172 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/N | 0.9154 | likely_pathogenic | 0.9327 | pathogenic | -0.957 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/P | 0.9774 | likely_pathogenic | 0.985 | pathogenic | 0.432 | Stabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
E/Q | 0.5644 | likely_pathogenic | 0.5797 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.752 | deleterious | N | 0.471480462 | None | None | N |
E/R | 0.9053 | likely_pathogenic | 0.9183 | pathogenic | 0.057 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/S | 0.8094 | likely_pathogenic | 0.8251 | pathogenic | -1.32 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
E/T | 0.8038 | likely_pathogenic | 0.8336 | pathogenic | -0.938 | Destabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | N |
E/V | 0.7437 | likely_pathogenic | 0.7781 | pathogenic | 0.432 | Stabilizing | 0.999 | D | 0.777 | deleterious | N | 0.470328373 | None | None | N |
E/W | 0.9963 | likely_pathogenic | 0.9971 | pathogenic | 0.784 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Y | 0.9783 | likely_pathogenic | 0.9829 | pathogenic | 0.823 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.