Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20659 | 62200;62201;62202 | chr2:178589750;178589749;178589748 | chr2:179454477;179454476;179454475 |
N2AB | 19018 | 57277;57278;57279 | chr2:178589750;178589749;178589748 | chr2:179454477;179454476;179454475 |
N2A | 18091 | 54496;54497;54498 | chr2:178589750;178589749;178589748 | chr2:179454477;179454476;179454475 |
N2B | 11594 | 35005;35006;35007 | chr2:178589750;178589749;178589748 | chr2:179454477;179454476;179454475 |
Novex-1 | 11719 | 35380;35381;35382 | chr2:178589750;178589749;178589748 | chr2:179454477;179454476;179454475 |
Novex-2 | 11786 | 35581;35582;35583 | chr2:178589750;178589749;178589748 | chr2:179454477;179454476;179454475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 1.0 | N | 0.867 | 0.486 | 0.603037435086 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85951E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1597 | likely_benign | 0.1435 | benign | -1.331 | Destabilizing | 0.999 | D | 0.863 | deleterious | N | 0.47905283 | None | None | N |
P/C | 0.8808 | likely_pathogenic | 0.8411 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
P/D | 0.9824 | likely_pathogenic | 0.9755 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/E | 0.9297 | likely_pathogenic | 0.8893 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/F | 0.9849 | likely_pathogenic | 0.9772 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
P/G | 0.7293 | likely_pathogenic | 0.7389 | pathogenic | -1.66 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/H | 0.8841 | likely_pathogenic | 0.8555 | pathogenic | -1.117 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.521301728 | None | None | N |
P/I | 0.9499 | likely_pathogenic | 0.9181 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/K | 0.943 | likely_pathogenic | 0.9149 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/L | 0.8141 | likely_pathogenic | 0.7484 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.886 | deleterious | N | 0.500662577 | None | None | N |
P/M | 0.9268 | likely_pathogenic | 0.8995 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
P/N | 0.9367 | likely_pathogenic | 0.9299 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/Q | 0.81 | likely_pathogenic | 0.7559 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/R | 0.8737 | likely_pathogenic | 0.8225 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.520541259 | None | None | N |
P/S | 0.5249 | ambiguous | 0.4817 | ambiguous | -1.425 | Destabilizing | 1.0 | D | 0.891 | deleterious | N | 0.480787577 | None | None | N |
P/T | 0.6913 | likely_pathogenic | 0.5965 | pathogenic | -1.295 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.50851339 | None | None | N |
P/V | 0.8427 | likely_pathogenic | 0.7725 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/W | 0.9918 | likely_pathogenic | 0.9878 | pathogenic | -1.145 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/Y | 0.9788 | likely_pathogenic | 0.9709 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.